Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHGBP05060 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CHGBP05060 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
CHGBP05060 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CHGBP05060 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHGBP05060 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CHGBP05060 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
CHGBP05060 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHGBP05060 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CHGBP05060 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHGBP05060 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHGBP05060 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHGBP05060 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.51■□□□□ 0.87
CHGBP05060 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CHGBP05060 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHGBP05060 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.51■□□□□ 0.87
CHGBP05060 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.51■□□□□ 0.87
CHGBP05060 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHGBP05060 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.51■□□□□ 0.87
CHGBP05060 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHGBP05060 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.51■□□□□ 0.87
CHGBP05060 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHGBP05060 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.51■□□□□ 0.87
CHGBP05060 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHGBP05060 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHGBP05060 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
CHGBP05060 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHGBP05060 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHGBP05060 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHGBP05060 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHGBP05060 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CHGBP05060 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.5■□□□□ 0.87
CHGBP05060 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CHGBP05060 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.5■□□□□ 0.87
CHGBP05060 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.5■□□□□ 0.87
CHGBP05060 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.5■□□□□ 0.87
CHGBP05060 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHGBP05060 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CHGBP05060 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.5■□□□□ 0.87
CHGBP05060 GGTLC5P-201ENST00000617623 998 ntBASIC20.5■□□□□ 0.87
CHGBP05060 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHGBP05060 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.5■□□□□ 0.87
CHGBP05060 SLC22A20-204ENST00000530038 1673 ntBASIC20.5■□□□□ 0.87
CHGBP05060 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.5■□□□□ 0.87
CHGBP05060 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHGBP05060 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CHGBP05060 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHGBP05060 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.5■□□□□ 0.87
CHGBP05060 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHGBP05060 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CHGBP05060 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHGBP05060 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.5■□□□□ 0.87
CHGBP05060 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CHGBP05060 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.49■□□□□ 0.87
CHGBP05060 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHGBP05060 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHGBP05060 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHGBP05060 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHGBP05060 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHGBP05060 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHGBP05060 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.49■□□□□ 0.87
CHGBP05060 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHGBP05060 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHGBP05060 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.49■□□□□ 0.87
CHGBP05060 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
CHGBP05060 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.49■□□□□ 0.87
CHGBP05060 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CHGBP05060 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
CHGBP05060 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.49■□□□□ 0.87
CHGBP05060 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CHGBP05060 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHGBP05060 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHGBP05060 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.49■□□□□ 0.87
CHGBP05060 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CHGBP05060 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHGBP05060 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.49■□□□□ 0.87
CHGBP05060 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CHGBP05060 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHGBP05060 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHGBP05060 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHGBP05060 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHGBP05060 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHGBP05060 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CHGBP05060 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.48■□□□□ 0.87
CHGBP05060 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CHGBP05060 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.48■□□□□ 0.87
CHGBP05060 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHGBP05060 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHGBP05060 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.48■□□□□ 0.87
CHGBP05060 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.48■□□□□ 0.87
CHGBP05060 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.48■□□□□ 0.87
CHGBP05060 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHGBP05060 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CHGBP05060 FAM185BP-201ENST00000443595 716 ntBASIC20.48■□□□□ 0.87
CHGBP05060 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.48■□□□□ 0.87
CHGBP05060 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHGBP05060 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.48■□□□□ 0.87
CHGBP05060 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CHGBP05060 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHGBP05060 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms