Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DPB1P04440 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.46■□□□□ 0.07
HLA-DPB1P04440 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
HLA-DPB1P04440 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DPB1P04440 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DPB1P04440 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HLA-DPB1P04440 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.46■□□□□ 0.06
HLA-DPB1P04440 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.46■□□□□ 0.06
HLA-DPB1P04440 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
HLA-DPB1P04440 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 MIR662-201ENST00000384847 95 ntBASIC15.45■□□□□ 0.06
HLA-DPB1P04440 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 AC010331.1-201ENST00000611423 582 ntBASIC15.45■□□□□ 0.06
HLA-DPB1P04440 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 AC092053.1-201ENST00000605787 1936 ntBASIC15.45■□□□□ 0.06
HLA-DPB1P04440 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DPB1P04440 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 AC022188.1-201ENST00000620960 1664 ntBASIC15.44■□□□□ 0.06
HLA-DPB1P04440 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 AL645929.1-201ENST00000420084 975 ntBASIC15.44■□□□□ 0.06
HLA-DPB1P04440 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 KRT18P35-201ENST00000510488 1269 ntBASIC15.44■□□□□ 0.06
HLA-DPB1P04440 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 AC004263.2-201ENST00000617183 678 ntBASIC15.44■□□□□ 0.06
HLA-DPB1P04440 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DPB1P04440 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms