Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.43□□□□□ -0.1
CD74P04233 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.43□□□□□ -0.1
CD74P04233 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.43□□□□□ -0.1
CD74P04233 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.43□□□□□ -0.1
CD74P04233 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.43□□□□□ -0.1
CD74P04233 AC079602.3-201ENST00000623931 403 ntBASIC14.43□□□□□ -0.1
CD74P04233 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.43□□□□□ -0.1
CD74P04233 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.43□□□□□ -0.1
CD74P04233 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.43□□□□□ -0.1
CD74P04233 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.43□□□□□ -0.1
CD74P04233 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
CD74P04233 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CD74P04233 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.43□□□□□ -0.1
CD74P04233 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.43□□□□□ -0.1
CD74P04233 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.43□□□□□ -0.1
CD74P04233 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.42□□□□□ -0.1
CD74P04233 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CD74P04233 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.42□□□□□ -0.1
CD74P04233 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CD74P04233 MIR1238-201ENST00000408483 83 ntBASIC14.42□□□□□ -0.1
CD74P04233 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.42□□□□□ -0.1
CD74P04233 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.42□□□□□ -0.1
CD74P04233 UBE2SP1-201ENST00000450587 669 ntBASIC14.42□□□□□ -0.1
CD74P04233 HLA-J-202ENST00000469281 1241 ntBASIC14.42□□□□□ -0.1
CD74P04233 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
CD74P04233 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.42□□□□□ -0.1
CD74P04233 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.42□□□□□ -0.1
CD74P04233 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.42□□□□□ -0.1
CD74P04233 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.42□□□□□ -0.1
CD74P04233 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
CD74P04233 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.42□□□□□ -0.1
CD74P04233 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CD74P04233 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.42□□□□□ -0.1
CD74P04233 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
CD74P04233 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.42□□□□□ -0.1
CD74P04233 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD74P04233 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD74P04233 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD74P04233 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD74P04233 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.41□□□□□ -0.1
CD74P04233 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD74P04233 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD74P04233 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.41□□□□□ -0.1
CD74P04233 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.41□□□□□ -0.1
CD74P04233 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD74P04233 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.41□□□□□ -0.1
CD74P04233 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.41□□□□□ -0.1
CD74P04233 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD74P04233 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.41□□□□□ -0.1
CD74P04233 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.41□□□□□ -0.1
CD74P04233 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CD74P04233 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.41□□□□□ -0.1
CD74P04233 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD74P04233 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.41□□□□□ -0.1
CD74P04233 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
CD74P04233 IGHGP-201ENST00000390555 1178 ntBASIC14.41□□□□□ -0.1
CD74P04233 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CD74P04233 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.41□□□□□ -0.1
CD74P04233 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.41□□□□□ -0.1
CD74P04233 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.41□□□□□ -0.1
CD74P04233 FAM201B-201ENST00000458407 597 ntBASIC14.41□□□□□ -0.1
CD74P04233 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms