Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AP000344.2-201ENST00000512987 629 ntBASIC18.7■□□□□ 0.58
VTNP04004 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.7■□□□□ 0.58
VTNP04004 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.7■□□□□ 0.58
VTNP04004 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VTNP04004 MIR4515-201ENST00000584082 81 ntBASIC18.7■□□□□ 0.58
VTNP04004 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.7■□□□□ 0.58
VTNP04004 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.7■□□□□ 0.58
VTNP04004 AL513210.1-201ENST00000629608 234 ntBASIC18.7■□□□□ 0.58
VTNP04004 AC105339.1-204ENST00000636249 355 ntBASIC18.7■□□□□ 0.58
VTNP04004 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VTNP04004 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.7■□□□□ 0.58
VTNP04004 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.7■□□□□ 0.58
VTNP04004 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
VTNP04004 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
VTNP04004 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
VTNP04004 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
VTNP04004 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
VTNP04004 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
VTNP04004 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 CROCCP2-202ENST00000412962 2773 ntBASIC18.69■□□□□ 0.58
VTNP04004 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.69■□□□□ 0.58
VTNP04004 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
VTNP04004 AC004461.1-201ENST00000412461 403 ntBASIC18.69■□□□□ 0.58
VTNP04004 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.69■□□□□ 0.58
VTNP04004 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.69■□□□□ 0.58
VTNP04004 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.69■□□□□ 0.58
VTNP04004 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.69■□□□□ 0.58
VTNP04004 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.69■□□□□ 0.58
VTNP04004 AL355385.1-201ENST00000606123 409 ntBASIC18.69■□□□□ 0.58
VTNP04004 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 AC099522.2-201ENST00000607001 744 ntBASIC18.69■□□□□ 0.58
VTNP04004 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
VTNP04004 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.69■□□□□ 0.58
VTNP04004 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.69■□□□□ 0.58
VTNP04004 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
VTNP04004 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.69■□□□□ 0.58
VTNP04004 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VTNP04004 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VTNP04004 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.68■□□□□ 0.58
VTNP04004 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VTNP04004 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
VTNP04004 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VTNP04004 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VTNP04004 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VTNP04004 AC002056.1-201ENST00000395613 760 ntBASIC18.68■□□□□ 0.58
VTNP04004 HMGA1P7-201ENST00000406908 502 ntBASIC18.68■□□□□ 0.58
VTNP04004 ADH5P3-201ENST00000433842 1137 ntBASIC18.68■□□□□ 0.58
VTNP04004 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.68■□□□□ 0.58
VTNP04004 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.68■□□□□ 0.58
VTNP04004 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
VTNP04004 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.68■□□□□ 0.58
VTNP04004 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.68■□□□□ 0.58
VTNP04004 AC005412.3-201ENST00000580309 715 ntBASIC18.68■□□□□ 0.58
VTNP04004 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.68■□□□□ 0.58
VTNP04004 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VTNP04004 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.68■□□□□ 0.58
VTNP04004 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VTNP04004 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VTNP04004 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.68■□□□□ 0.58
VTNP04004 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VTNP04004 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.68■□□□□ 0.58
VTNP04004 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.68■□□□□ 0.58
VTNP04004 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
VTNP04004 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VTNP04004 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VTNP04004 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
VTNP04004 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
VTNP04004 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VTNP04004 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VTNP04004 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VTNP04004 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms