Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6AP02538 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
KRT6AP02538 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6AP02538 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6AP02538 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6AP02538 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
KRT6AP02538 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KRT6AP02538 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
KRT6AP02538 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT6AP02538 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
KRT6AP02538 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
KRT6AP02538 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
KRT6AP02538 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
KRT6AP02538 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT6AP02538 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.64■□□□□ 0.25
KRT6AP02538 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT6AP02538 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 RCN1P2-201ENST00000398357 915 ntBASIC16.64■□□□□ 0.25
KRT6AP02538 POM121L3P-201ENST00000419331 1163 ntBASIC16.64■□□□□ 0.25
KRT6AP02538 IGHV3-47-201ENST00000425060 335 ntBASIC16.64■□□□□ 0.25
KRT6AP02538 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.64■□□□□ 0.25
KRT6AP02538 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.64■□□□□ 0.25
KRT6AP02538 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 AC104819.1-201ENST00000504587 486 ntBASIC16.64■□□□□ 0.25
KRT6AP02538 AC074051.2-201ENST00000565115 352 ntBASIC16.64■□□□□ 0.25
KRT6AP02538 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.64■□□□□ 0.25
KRT6AP02538 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.64■□□□□ 0.25
KRT6AP02538 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT6AP02538 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.64■□□□□ 0.25
KRT6AP02538 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 AC114341.1-201ENST00000618070 349 ntBASIC16.64■□□□□ 0.25
KRT6AP02538 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
KRT6AP02538 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
KRT6AP02538 GPR89P-201ENST00000407924 1495 ntBASIC16.64■□□□□ 0.25
KRT6AP02538 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT6AP02538 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT6AP02538 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.64■□□□□ 0.25
KRT6AP02538 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
KRT6AP02538 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
KRT6AP02538 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.64■□□□□ 0.25
KRT6AP02538 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
KRT6AP02538 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
KRT6AP02538 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT6AP02538 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
KRT6AP02538 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT6AP02538 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT6AP02538 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.63■□□□□ 0.25
KRT6AP02538 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
KRT6AP02538 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 SIGLEC30P-201ENST00000455569 941 ntBASIC16.63■□□□□ 0.25
KRT6AP02538 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KRT6AP02538 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.63■□□□□ 0.25
KRT6AP02538 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT6AP02538 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.63■□□□□ 0.25
KRT6AP02538 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
KRT6AP02538 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.63■□□□□ 0.25
KRT6AP02538 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT6AP02538 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 PMPCAP1-201ENST00000508114 1576 ntBASIC16.63■□□□□ 0.25
KRT6AP02538 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT6AP02538 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT6AP02538 AGGF1P2-201ENST00000426656 2106 ntBASIC16.63■□□□□ 0.25
KRT6AP02538 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms