Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LGI1O95970 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LGI1O95970 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LGI1O95970 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.85■□□□□ 0.13
LGI1O95970 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LGI1O95970 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LGI1O95970 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LGI1O95970 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.85■□□□□ 0.13
LGI1O95970 AL603756.1-201ENST00000606511 2163 ntBASIC15.85■□□□□ 0.13
LGI1O95970 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LGI1O95970 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.85■□□□□ 0.13
LGI1O95970 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.85■□□□□ 0.13
LGI1O95970 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.85■□□□□ 0.13
LGI1O95970 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
LGI1O95970 AP002383.4-201ENST00000442518 975 ntBASIC15.85■□□□□ 0.13
LGI1O95970 KRT17P6-201ENST00000453795 1220 ntBASIC15.85■□□□□ 0.13
LGI1O95970 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.85■□□□□ 0.13
LGI1O95970 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.85■□□□□ 0.13
LGI1O95970 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LGI1O95970 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.85■□□□□ 0.13
LGI1O95970 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.85■□□□□ 0.13
LGI1O95970 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LGI1O95970 BNIP3P18-201ENST00000593976 575 ntBASIC15.85■□□□□ 0.13
LGI1O95970 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.85■□□□□ 0.13
LGI1O95970 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LGI1O95970 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LGI1O95970 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.85■□□□□ 0.13
LGI1O95970 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LGI1O95970 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.85■□□□□ 0.13
LGI1O95970 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
LGI1O95970 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LGI1O95970 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LGI1O95970 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LGI1O95970 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LGI1O95970 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LGI1O95970 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LGI1O95970 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LGI1O95970 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.84■□□□□ 0.13
LGI1O95970 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LGI1O95970 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LGI1O95970 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.84■□□□□ 0.13
LGI1O95970 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.84■□□□□ 0.13
LGI1O95970 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.84■□□□□ 0.13
LGI1O95970 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LGI1O95970 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LGI1O95970 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LGI1O95970 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.84■□□□□ 0.13
LGI1O95970 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LGI1O95970 RCN1P2-201ENST00000398357 915 ntBASIC15.84■□□□□ 0.13
LGI1O95970 IGHV3-47-201ENST00000425060 335 ntBASIC15.84■□□□□ 0.13
LGI1O95970 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.84■□□□□ 0.13
LGI1O95970 MINOS1P3-201ENST00000457048 203 ntBASIC15.84■□□□□ 0.13
LGI1O95970 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.84■□□□□ 0.13
LGI1O95970 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.84■□□□□ 0.13
LGI1O95970 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.84■□□□□ 0.13
LGI1O95970 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
LGI1O95970 AP002414.4-201ENST00000589764 1148 ntBASIC15.84■□□□□ 0.13
LGI1O95970 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.84■□□□□ 0.13
LGI1O95970 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.84■□□□□ 0.13
LGI1O95970 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LGI1O95970 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LGI1O95970 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LGI1O95970 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.84■□□□□ 0.13
LGI1O95970 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LGI1O95970 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LGI1O95970 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LGI1O95970 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LGI1O95970 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LGI1O95970 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
LGI1O95970 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LGI1O95970 NSUN5P1-202ENST00000421140 1535 ntBASIC15.84■□□□□ 0.13
LGI1O95970 NSUN5P2-203ENST00000457352 1529 ntBASIC15.84■□□□□ 0.13
LGI1O95970 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
LGI1O95970 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.84■□□□□ 0.13
LGI1O95970 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.83■□□□□ 0.13
LGI1O95970 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
LGI1O95970 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LGI1O95970 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
LGI1O95970 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LGI1O95970 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LGI1O95970 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
LGI1O95970 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LGI1O95970 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.83■□□□□ 0.12
LGI1O95970 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LGI1O95970 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LGI1O95970 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LGI1O95970 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
LGI1O95970 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LGI1O95970 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LGI1O95970 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LGI1O95970 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
LGI1O95970 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LGI1O95970 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.83■□□□□ 0.12
LGI1O95970 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.83■□□□□ 0.12
LGI1O95970 TOB2P1-201ENST00000469761 992 ntBASIC15.83■□□□□ 0.12
LGI1O95970 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.83■□□□□ 0.12
LGI1O95970 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.83■□□□□ 0.12
LGI1O95970 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LGI1O95970 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
LGI1O95970 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms