Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AL590787.1-201ENST00000568856 1315 ntBASIC18.39■□□□□ 0.53
CSPG5O95196 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG5O95196 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG5O95196 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CSPG5O95196 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG5O95196 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.39■□□□□ 0.53
CSPG5O95196 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSPG5O95196 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CSPG5O95196 AC090164.3-201ENST00000610780 2143 ntBASIC18.38■□□□□ 0.53
CSPG5O95196 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CSPG5O95196 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG5O95196 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG5O95196 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CSPG5O95196 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.38■□□□□ 0.53
CSPG5O95196 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG5O95196 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.38■□□□□ 0.53
CSPG5O95196 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CSPG5O95196 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.38■□□□□ 0.53
CSPG5O95196 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG5O95196 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG5O95196 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG5O95196 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG5O95196 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.38■□□□□ 0.53
CSPG5O95196 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CSPG5O95196 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.38■□□□□ 0.53
CSPG5O95196 AL627223.1-201ENST00000416693 442 ntBASIC18.38■□□□□ 0.53
CSPG5O95196 AC005034.1-201ENST00000426657 489 ntBASIC18.38■□□□□ 0.53
CSPG5O95196 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.38■□□□□ 0.53
CSPG5O95196 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.38■□□□□ 0.53
CSPG5O95196 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG5O95196 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.38■□□□□ 0.53
CSPG5O95196 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG5O95196 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.38■□□□□ 0.53
CSPG5O95196 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG5O95196 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CSPG5O95196 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.38■□□□□ 0.53
CSPG5O95196 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.38■□□□□ 0.53
CSPG5O95196 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.38■□□□□ 0.53
CSPG5O95196 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG5O95196 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG5O95196 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CSPG5O95196 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG5O95196 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.38■□□□□ 0.53
CSPG5O95196 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CSPG5O95196 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CSPG5O95196 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CSPG5O95196 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CSPG5O95196 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSPG5O95196 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.38■□□□□ 0.53
CSPG5O95196 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.38■□□□□ 0.53
CSPG5O95196 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CSPG5O95196 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CSPG5O95196 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.37■□□□□ 0.53
CSPG5O95196 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.37■□□□□ 0.53
CSPG5O95196 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CSPG5O95196 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CSPG5O95196 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CSPG5O95196 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CSPG5O95196 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.37■□□□□ 0.53
CSPG5O95196 INGX-202ENST00000489074 768 ntBASIC18.37■□□□□ 0.53
CSPG5O95196 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.37■□□□□ 0.53
CSPG5O95196 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.37■□□□□ 0.53
CSPG5O95196 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.37■□□□□ 0.53
CSPG5O95196 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
CSPG5O95196 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.37■□□□□ 0.53
CSPG5O95196 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.37■□□□□ 0.53
CSPG5O95196 AL035252.4-201ENST00000624174 288 ntBASIC18.37■□□□□ 0.53
CSPG5O95196 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.37■□□□□ 0.53
CSPG5O95196 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.37■□□□□ 0.53
CSPG5O95196 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.37■□□□□ 0.53
CSPG5O95196 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.37■□□□□ 0.53
CSPG5O95196 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CSPG5O95196 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.37■□□□□ 0.53
CSPG5O95196 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.37■□□□□ 0.53
CSPG5O95196 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CSPG5O95196 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CSPG5O95196 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CSPG5O95196 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.37■□□□□ 0.53
CSPG5O95196 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSPG5O95196 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSPG5O95196 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CSPG5O95196 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms