Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RNF40O75150 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF40O75150 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF40O75150 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF40O75150 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF40O75150 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF40O75150 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF40O75150 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF40O75150 CROCCP1-201ENST00000426910 5675 ntBASIC18.56■□□□□ 0.56
RNF40O75150 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF40O75150 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF40O75150 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF40O75150 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RNF40O75150 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF40O75150 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF40O75150 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF40O75150 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RNF40O75150 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
RNF40O75150 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF40O75150 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF40O75150 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF40O75150 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RNF40O75150 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.55■□□□□ 0.56
RNF40O75150 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RNF40O75150 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF40O75150 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF40O75150 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RNF40O75150 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RNF40O75150 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF40O75150 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF40O75150 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF40O75150 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF40O75150 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF40O75150 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF40O75150 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF40O75150 PMS2P1-201ENST00000431037 1228 ntBASIC18.55■□□□□ 0.56
RNF40O75150 KRT18P67-201ENST00000432816 1264 ntBASIC18.55■□□□□ 0.56
RNF40O75150 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.55■□□□□ 0.56
RNF40O75150 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF40O75150 AC114341.1-201ENST00000618070 349 ntBASIC18.55■□□□□ 0.56
RNF40O75150 AC103702.1-201ENST00000548801 2630 ntBASIC18.55■□□□□ 0.56
RNF40O75150 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF40O75150 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF40O75150 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF40O75150 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RNF40O75150 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF40O75150 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.55■□□□□ 0.56
RNF40O75150 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF40O75150 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF40O75150 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF40O75150 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF40O75150 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF40O75150 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF40O75150 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF40O75150 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF40O75150 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF40O75150 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF40O75150 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF40O75150 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF40O75150 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF40O75150 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.54■□□□□ 0.56
RNF40O75150 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF40O75150 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF40O75150 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF40O75150 AL031284.1-201ENST00000419297 478 ntBASIC18.54■□□□□ 0.56
RNF40O75150 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF40O75150 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF40O75150 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF40O75150 SLC25A1P1-201ENST00000528351 927 ntBASIC18.54■□□□□ 0.56
RNF40O75150 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF40O75150 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF40O75150 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.54■□□□□ 0.56
RNF40O75150 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF40O75150 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF40O75150 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.54■□□□□ 0.56
RNF40O75150 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RNF40O75150 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF40O75150 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF40O75150 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF40O75150 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
RNF40O75150 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RNF40O75150 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF40O75150 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF40O75150 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF40O75150 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF40O75150 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
RNF40O75150 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RNF40O75150 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF40O75150 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF40O75150 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF40O75150 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF40O75150 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF40O75150 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF40O75150 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RNF40O75150 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RNF40O75150 OR6D1P-203ENST00000641209 4860 ntBASIC18.53■□□□□ 0.56
RNF40O75150 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RNF40O75150 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF40O75150 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF40O75150 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms