Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.23■□□□□ 0.03
GMDSO60547 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.23■□□□□ 0.03
GMDSO60547 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GMDSO60547 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GMDSO60547 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GMDSO60547 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GMDSO60547 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GMDSO60547 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GMDSO60547 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GMDSO60547 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GMDSO60547 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GMDSO60547 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GMDSO60547 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GMDSO60547 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.23■□□□□ 0.03
GMDSO60547 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
GMDSO60547 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GMDSO60547 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GMDSO60547 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GMDSO60547 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GMDSO60547 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GMDSO60547 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.23■□□□□ 0.03
GMDSO60547 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.22■□□□□ 0.03
GMDSO60547 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.22■□□□□ 0.03
GMDSO60547 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.22■□□□□ 0.03
GMDSO60547 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
GMDSO60547 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
GMDSO60547 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GMDSO60547 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
GMDSO60547 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.22■□□□□ 0.03
GMDSO60547 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
GMDSO60547 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.22■□□□□ 0.03
GMDSO60547 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
GMDSO60547 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GMDSO60547 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.22■□□□□ 0.03
GMDSO60547 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.22■□□□□ 0.03
GMDSO60547 AC011840.4-201ENST00000578471 627 ntBASIC15.22■□□□□ 0.03
GMDSO60547 AL592071.1-201ENST00000611956 408 ntBASIC15.22■□□□□ 0.03
GMDSO60547 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.22■□□□□ 0.03
GMDSO60547 PCDHB17P-201ENST00000539533 2393 ntBASIC15.22■□□□□ 0.03
GMDSO60547 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.22■□□□□ 0.03
GMDSO60547 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
GMDSO60547 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.22■□□□□ 0.03
GMDSO60547 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
GMDSO60547 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 AC016734.2-201ENST00000624325 1377 ntBASIC15.22■□□□□ 0.03
GMDSO60547 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
GMDSO60547 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GMDSO60547 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GMDSO60547 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.21■□□□□ 0.03
GMDSO60547 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.21■□□□□ 0.03
GMDSO60547 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.21■□□□□ 0.03
GMDSO60547 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
GMDSO60547 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GMDSO60547 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.21■□□□□ 0.03
GMDSO60547 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.21■□□□□ 0.03
GMDSO60547 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
GMDSO60547 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
GMDSO60547 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.21■□□□□ 0.03
GMDSO60547 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.21■□□□□ 0.03
GMDSO60547 VENTXP7-201ENST00000475503 772 ntBASIC15.21■□□□□ 0.03
GMDSO60547 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GMDSO60547 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GMDSO60547 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.21■□□□□ 0.03
GMDSO60547 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms