Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC004790.2-201ENST00000623588 572 ntBASIC19.68■□□□□ 0.74
PRPF3O43395 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF3O43395 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PRPF3O43395 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF3O43395 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF3O43395 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF3O43395 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PRPF3O43395 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.68■□□□□ 0.74
PRPF3O43395 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF3O43395 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF3O43395 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRPF3O43395 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.68■□□□□ 0.74
PRPF3O43395 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.68■□□□□ 0.74
PRPF3O43395 PCDHB17P-201ENST00000539533 2393 ntBASIC19.68■□□□□ 0.74
PRPF3O43395 KRT8P49-201ENST00000604166 1432 ntBASIC19.68■□□□□ 0.74
PRPF3O43395 PRORSD1P-202ENST00000563365 2154 ntBASIC19.67■□□□□ 0.74
PRPF3O43395 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF3O43395 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.67■□□□□ 0.74
PRPF3O43395 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF3O43395 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF3O43395 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.67■□□□□ 0.74
PRPF3O43395 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.67■□□□□ 0.74
PRPF3O43395 AC009947.1-201ENST00000444350 727 ntBASIC19.67■□□□□ 0.74
PRPF3O43395 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF3O43395 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF3O43395 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.67■□□□□ 0.74
PRPF3O43395 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.67■□□□□ 0.74
PRPF3O43395 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF3O43395 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF3O43395 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF3O43395 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF3O43395 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.67■□□□□ 0.74
PRPF3O43395 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.67■□□□□ 0.74
PRPF3O43395 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF3O43395 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PRPF3O43395 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF3O43395 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPF3O43395 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.67■□□□□ 0.74
PRPF3O43395 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PRPF3O43395 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF3O43395 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF3O43395 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
PRPF3O43395 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.66■□□□□ 0.74
PRPF3O43395 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF3O43395 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF3O43395 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PRPF3O43395 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF3O43395 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF3O43395 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF3O43395 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PRPF3O43395 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.66■□□□□ 0.74
PRPF3O43395 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.66■□□□□ 0.74
PRPF3O43395 AC079776.4-201ENST00000511039 504 ntBASIC19.66■□□□□ 0.74
PRPF3O43395 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.66■□□□□ 0.74
PRPF3O43395 OR7E47P-204ENST00000575924 449 ntBASIC19.66■□□□□ 0.74
PRPF3O43395 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PRPF3O43395 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF3O43395 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.66■□□□□ 0.74
PRPF3O43395 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF3O43395 TOP3BP1-201ENST00000420768 1380 ntBASIC19.66■□□□□ 0.74
PRPF3O43395 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF3O43395 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PRPF3O43395 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
PRPF3O43395 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PRPF3O43395 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PRPF3O43395 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF3O43395 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PRPF3O43395 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRPF3O43395 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRPF3O43395 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRPF3O43395 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRPF3O43395 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRPF3O43395 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.65■□□□□ 0.74
PRPF3O43395 MRPL20P1-201ENST00000400819 433 ntBASIC19.65■□□□□ 0.74
PRPF3O43395 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.65■□□□□ 0.74
PRPF3O43395 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.65■□□□□ 0.74
PRPF3O43395 AC108751.1-201ENST00000490852 363 ntBASIC19.65■□□□□ 0.74
PRPF3O43395 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.65■□□□□ 0.74
PRPF3O43395 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.65■□□□□ 0.74
PRPF3O43395 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.65■□□□□ 0.74
PRPF3O43395 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.65■□□□□ 0.74
PRPF3O43395 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRPF3O43395 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.65■□□□□ 0.74
PRPF3O43395 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.65■□□□□ 0.74
PRPF3O43395 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PRPF3O43395 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRPF3O43395 PCDHA12-202ENST00000613593 2588 ntBASIC19.65■□□□□ 0.74
PRPF3O43395 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PRPF3O43395 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRPF3O43395 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.65■□□□□ 0.74
PRPF3O43395 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
PRPF3O43395 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.65■□□□□ 0.74
PRPF3O43395 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
PRPF3O43395 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PRPF3O43395 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.64■□□□□ 0.74
PRPF3O43395 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PRPF3O43395 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF3O43395 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRPF3O43395 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.64■□□□□ 0.73
PRPF3O43395 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms