Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNRC18O15417 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC18O15417 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TNRC18O15417 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC18O15417 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC18O15417 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TNRC18O15417 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC18O15417 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC18O15417 RN7SL618P-201ENST00000477850 296 ntBASIC18.28■□□□□ 0.52
TNRC18O15417 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC18.28■□□□□ 0.52
TNRC18O15417 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.28■□□□□ 0.52
TNRC18O15417 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC18O15417 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
TNRC18O15417 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC18O15417 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.28■□□□□ 0.52
TNRC18O15417 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC18O15417 MIR326-201ENST00000362220 95 ntBASIC18.28■□□□□ 0.52
TNRC18O15417 AC004461.2-201ENST00000629517 803 ntBASIC18.28■□□□□ 0.52
TNRC18O15417 CLK3P2-201ENST00000427566 1453 ntBASIC18.28■□□□□ 0.52
TNRC18O15417 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC18O15417 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.28■□□□□ 0.52
TNRC18O15417 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC18O15417 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TNRC18O15417 AC007952.6-201ENST00000573168 2673 ntBASIC18.28■□□□□ 0.52
TNRC18O15417 AC003957.1-201ENST00000625108 2673 ntBASIC18.28■□□□□ 0.52
TNRC18O15417 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.28■□□□□ 0.52
TNRC18O15417 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TNRC18O15417 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.28■□□□□ 0.52
TNRC18O15417 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC18O15417 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.28■□□□□ 0.52
TNRC18O15417 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNRC18O15417 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC18O15417 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
TNRC18O15417 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.27■□□□□ 0.52
TNRC18O15417 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.27■□□□□ 0.52
TNRC18O15417 IGHV3-52-201ENST00000519770 353 ntBASIC18.27■□□□□ 0.52
TNRC18O15417 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.27■□□□□ 0.52
TNRC18O15417 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC18O15417 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC18O15417 LINC01006-201ENST00000333319 2292 ntBASIC18.27■□□□□ 0.52
TNRC18O15417 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC18O15417 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC18O15417 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC18O15417 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TNRC18O15417 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC18O15417 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC18O15417 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC18O15417 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC18O15417 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.27■□□□□ 0.52
TNRC18O15417 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.27■□□□□ 0.52
TNRC18O15417 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNRC18O15417 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TNRC18O15417 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.27■□□□□ 0.51
TNRC18O15417 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.27■□□□□ 0.51
TNRC18O15417 AL607033.1-201ENST00000623900 1599 ntBASIC18.27■□□□□ 0.51
TNRC18O15417 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TNRC18O15417 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TNRC18O15417 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TNRC18O15417 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.27■□□□□ 0.51
TNRC18O15417 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.27■□□□□ 0.51
TNRC18O15417 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.27■□□□□ 0.51
TNRC18O15417 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.27■□□□□ 0.51
TNRC18O15417 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.27■□□□□ 0.51
TNRC18O15417 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
TNRC18O15417 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
TNRC18O15417 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.27■□□□□ 0.51
TNRC18O15417 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.26■□□□□ 0.51
TNRC18O15417 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC18O15417 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC18O15417 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.26■□□□□ 0.51
TNRC18O15417 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.26■□□□□ 0.51
TNRC18O15417 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.26■□□□□ 0.51
TNRC18O15417 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
TNRC18O15417 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.26■□□□□ 0.51
TNRC18O15417 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC18.26■□□□□ 0.51
TNRC18O15417 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC18O15417 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC18O15417 AL161938.1-201ENST00000569833 2180 ntBASIC18.26■□□□□ 0.51
TNRC18O15417 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC18O15417 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC18O15417 SLC22A20-204ENST00000530038 1673 ntBASIC18.26■□□□□ 0.51
TNRC18O15417 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC18O15417 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.26■□□□□ 0.51
TNRC18O15417 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.26■□□□□ 0.51
TNRC18O15417 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.26■□□□□ 0.51
TNRC18O15417 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.26■□□□□ 0.51
TNRC18O15417 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
TNRC18O15417 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TNRC18O15417 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC18O15417 AL157384.1-201ENST00000445995 2473 ntBASIC18.26■□□□□ 0.51
TNRC18O15417 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC18O15417 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC18O15417 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.26■□□□□ 0.51
TNRC18O15417 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TNRC18O15417 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.25■□□□□ 0.51
TNRC18O15417 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNRC18O15417 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TNRC18O15417 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TNRC18O15417 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNRC18O15417 FNTAP2-201ENST00000430308 634 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms