Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 PTCHD3P3-201ENST00000403073 906 ntBASIC12.23□□□□□ -0.45
LYRM9A8MSI8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LYRM9A8MSI8 AC098831.1-202ENST00000438821 336 ntBASIC12.23□□□□□ -0.45
LYRM9A8MSI8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.23□□□□□ -0.45
LYRM9A8MSI8 RNA5SP419-201ENST00000515908 135 ntBASIC12.23□□□□□ -0.45
LYRM9A8MSI8 IGHV3-65-201ENST00000523210 341 ntBASIC12.23□□□□□ -0.45
LYRM9A8MSI8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.23□□□□□ -0.45
LYRM9A8MSI8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.23□□□□□ -0.45
LYRM9A8MSI8 AC012640.2-201ENST00000561606 901 ntBASIC12.23□□□□□ -0.45
LYRM9A8MSI8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.23□□□□□ -0.45
LYRM9A8MSI8 AC116407.3-201ENST00000623905 1129 ntBASIC12.23□□□□□ -0.45
LYRM9A8MSI8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.23□□□□□ -0.45
LYRM9A8MSI8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
LYRM9A8MSI8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LYRM9A8MSI8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LYRM9A8MSI8 AC141586.5-201ENST00000624546 2050 ntBASIC12.23□□□□□ -0.45
LYRM9A8MSI8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.23□□□□□ -0.45
LYRM9A8MSI8 AC026471.1-201ENST00000564629 3026 ntBASIC12.23□□□□□ -0.45
LYRM9A8MSI8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LYRM9A8MSI8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
LYRM9A8MSI8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LYRM9A8MSI8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LYRM9A8MSI8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
LYRM9A8MSI8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 AC243591.1-201ENST00000452967 1364 ntBASIC12.22□□□□□ -0.45
LYRM9A8MSI8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 AL021920.2-201ENST00000624828 1351 ntBASIC12.22□□□□□ -0.45
LYRM9A8MSI8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 SLC25A1P3-201ENST00000395415 828 ntBASIC12.22□□□□□ -0.45
LYRM9A8MSI8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 AC117500.6-201ENST00000624871 588 ntBASIC12.22□□□□□ -0.45
LYRM9A8MSI8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LYRM9A8MSI8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.21□□□□□ -0.45
LYRM9A8MSI8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 MRPL20P1-201ENST00000400819 433 ntBASIC12.21□□□□□ -0.45
LYRM9A8MSI8 AL590627.1-203ENST00000421194 1026 ntBASIC12.21□□□□□ -0.45
LYRM9A8MSI8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 PAWRP1-201ENST00000451083 565 ntBASIC12.21□□□□□ -0.45
LYRM9A8MSI8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 AL049840.3-201ENST00000602669 611 ntBASIC12.21□□□□□ -0.45
LYRM9A8MSI8 BX640515.1-201ENST00000617215 977 ntBASIC12.21□□□□□ -0.45
LYRM9A8MSI8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LYRM9A8MSI8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms