Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC25.1■■□□□ 1.61
HFM1A2PYH4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HFM1A2PYH4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
HFM1A2PYH4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HFM1A2PYH4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
HFM1A2PYH4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
HFM1A2PYH4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
HFM1A2PYH4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
HFM1A2PYH4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC25.1■■□□□ 1.61
HFM1A2PYH4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC25.1■■□□□ 1.61
HFM1A2PYH4 RARRES2P8-201ENST00000566335 367 ntBASIC25.1■■□□□ 1.61
HFM1A2PYH4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
HFM1A2PYH4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC25.1■■□□□ 1.61
HFM1A2PYH4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC25.1■■□□□ 1.61
HFM1A2PYH4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HFM1A2PYH4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
HFM1A2PYH4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
HFM1A2PYH4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HFM1A2PYH4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HFM1A2PYH4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HFM1A2PYH4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HFM1A2PYH4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC25.09■■□□□ 1.61
HFM1A2PYH4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC25.09■■□□□ 1.61
HFM1A2PYH4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC25.09■■□□□ 1.61
HFM1A2PYH4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
HFM1A2PYH4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HFM1A2PYH4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HFM1A2PYH4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC25.09■■□□□ 1.61
HFM1A2PYH4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
HFM1A2PYH4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC25.09■■□□□ 1.61
HFM1A2PYH4 AL135744.1-201ENST00000565098 629 ntBASIC25.09■■□□□ 1.61
HFM1A2PYH4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
HFM1A2PYH4 AC105339.1-204ENST00000636249 355 ntBASIC25.09■■□□□ 1.61
HFM1A2PYH4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HFM1A2PYH4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
HFM1A2PYH4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HFM1A2PYH4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
HFM1A2PYH4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HFM1A2PYH4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC25.09■■□□□ 1.61
HFM1A2PYH4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
HFM1A2PYH4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC25.08■■□□□ 1.61
HFM1A2PYH4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
HFM1A2PYH4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
HFM1A2PYH4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
HFM1A2PYH4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
HFM1A2PYH4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
HFM1A2PYH4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
HFM1A2PYH4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
HFM1A2PYH4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
HFM1A2PYH4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC25.08■■□□□ 1.61
HFM1A2PYH4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
HFM1A2PYH4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC25.08■■□□□ 1.61
HFM1A2PYH4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC25.08■■□□□ 1.61
HFM1A2PYH4 RPS8P6-201ENST00000426177 609 ntBASIC25.08■■□□□ 1.61
HFM1A2PYH4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
HFM1A2PYH4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC25.08■■□□□ 1.61
HFM1A2PYH4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC25.08■■□□□ 1.61
HFM1A2PYH4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC25.08■■□□□ 1.61
HFM1A2PYH4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC25.08■■□□□ 1.61
HFM1A2PYH4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC25.08■■□□□ 1.61
HFM1A2PYH4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC25.08■■□□□ 1.6
HFM1A2PYH4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
HFM1A2PYH4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
HFM1A2PYH4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
HFM1A2PYH4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC25.07■■□□□ 1.6
HFM1A2PYH4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
HFM1A2PYH4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
HFM1A2PYH4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
HFM1A2PYH4 PMS2P4-201ENST00000412466 1052 ntBASIC25.07■■□□□ 1.6
HFM1A2PYH4 RN7SL589P-201ENST00000481268 310 ntBASIC25.07■■□□□ 1.6
HFM1A2PYH4 KRT8P48-201ENST00000515599 1220 ntBASIC25.07■■□□□ 1.6
HFM1A2PYH4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC25.07■■□□□ 1.6
HFM1A2PYH4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC25.07■■□□□ 1.6
HFM1A2PYH4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
HFM1A2PYH4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
HFM1A2PYH4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
HFM1A2PYH4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
HFM1A2PYH4 SLC9A3P2-201ENST00000447821 2021 ntBASIC25.07■■□□□ 1.6
HFM1A2PYH4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC25.07■■□□□ 1.6
HFM1A2PYH4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC25.07■■□□□ 1.6
HFM1A2PYH4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC25.07■■□□□ 1.6
HFM1A2PYH4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
HFM1A2PYH4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
HFM1A2PYH4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC25.06■■□□□ 1.6
HFM1A2PYH4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
HFM1A2PYH4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
HFM1A2PYH4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC25.06■■□□□ 1.6
HFM1A2PYH4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
HFM1A2PYH4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
HFM1A2PYH4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
HFM1A2PYH4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
HFM1A2PYH4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
HFM1A2PYH4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
HFM1A2PYH4 AC004461.1-201ENST00000412461 403 ntBASIC25.06■■□□□ 1.6
HFM1A2PYH4 AC092474.2-201ENST00000424288 719 ntBASIC25.06■■□□□ 1.6
HFM1A2PYH4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC25.06■■□□□ 1.6
HFM1A2PYH4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
HFM1A2PYH4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
HFM1A2PYH4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
HFM1A2PYH4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms