Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV5A0A0B4J1U4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV5A0A0B4J1U4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV5A0A0B4J1U4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV5A0A0B4J1U4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV5A0A0B4J1U4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.33■□□□□ 0.04
TRGV5A0A0B4J1U4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV5A0A0B4J1U4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 CNN2P11-201ENST00000429351 262 ntBASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 AC112191.1-201ENST00000523689 701 ntBASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 AC007613.1-201ENST00000572811 2597 ntBASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV5A0A0B4J1U4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 AP002472.1-201ENST00000577490 586 ntBASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 AC005412.3-201ENST00000580309 715 ntBASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 REXO1L3P-201ENST00000622202 1288 ntBASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRGV5A0A0B4J1U4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRGV5A0A0B4J1U4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV5A0A0B4J1U4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV5A0A0B4J1U4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV5A0A0B4J1U4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV5A0A0B4J1U4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV5A0A0B4J1U4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV5A0A0B4J1U4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV5A0A0B4J1U4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV5A0A0B4J1U4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
TRGV5A0A0B4J1U4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV5A0A0B4J1U4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms