Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB2Q9Y5E7 AC016396.2-201ENST00000562575 1417 ntBASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 AC005829.1-201ENST00000570002 483 ntBASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 AP001160.2-201ENST00000596071 487 ntBASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB2Q9Y5E7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 RHOQP3-201ENST00000437982 621 ntBASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 BCAR1-209ENST00000546196 1340 ntBASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 OR6D1P-202ENST00000641007 5290 ntBASIC18.73■□□□□ 0.59
PCDHB2Q9Y5E7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 LTB4R2-202ENST00000528054 3092 ntBASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 AC211486.1-202ENST00000416371 468 ntBASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 ALG1L5P-201ENST00000482043 771 ntBASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 AC211476.1-201ENST00000503899 468 ntBASIC18.72■□□□□ 0.59
PCDHB2Q9Y5E7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms