Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 HLA-V-201ENST00000429037 534 ntBASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 HNRNPA3P5-201ENST00000455201 833 ntBASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 AC090164.3-201ENST00000610780 2143 ntBASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 AC003101.2-201ENST00000612557 442 ntBASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 AL138828.2-201ENST00000615812 383 ntBASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTCBQ9Y3I0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 AC142381.1-201ENST00000426099 345 ntBASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 AP001350.2-201ENST00000625104 1094 ntBASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTCBQ9Y3I0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 KRT17P7-201ENST00000451704 1104 ntBASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 AC007967.4-201ENST00000614700 386 ntBASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 AL138781.2-201ENST00000617896 1843 ntBASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 AP3S2-216ENST00000617003 1561 ntBASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RTCBQ9Y3I0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RTCBQ9Y3I0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RTCBQ9Y3I0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RTCBQ9Y3I0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
RTCBQ9Y3I0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.39■■□□□ 1.02
RTCBQ9Y3I0 CU639417.3-201ENST00000624240 1404 ntBASIC21.39■■□□□ 1.02
RTCBQ9Y3I0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.39■■□□□ 1.02
RTCBQ9Y3I0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC21.39■■□□□ 1.02
RTCBQ9Y3I0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RTCBQ9Y3I0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RTCBQ9Y3I0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTCBQ9Y3I0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RTCBQ9Y3I0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RTCBQ9Y3I0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC21.39■■□□□ 1.01
RTCBQ9Y3I0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC21.39■■□□□ 1.01
RTCBQ9Y3I0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.39■■□□□ 1.01
RTCBQ9Y3I0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC21.39■■□□□ 1.01
RTCBQ9Y3I0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTCBQ9Y3I0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.39■■□□□ 1.01
RTCBQ9Y3I0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms