Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 RNA5SP413-201ENST00000516373 109 ntBASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 AP002490.2-201ENST00000524791 560 ntBASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 AL023803.3-201ENST00000615559 522 ntBASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 AC092850.2-201ENST00000623821 2697 ntBASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPRKBQ9Y3C4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TPRKBQ9Y3C4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TPRKBQ9Y3C4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 MTHFR-217ENST00000641820 1569 ntBASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 SLC25A1P2-201ENST00000430693 912 ntBASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 PVRIG2P-201ENST00000435460 978 ntBASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 SEC1P-202ENST00000473944 940 ntBASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 AC006538.1-201ENST00000567905 1585 ntBASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TPRKBQ9Y3C4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TPRKBQ9Y3C4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms