Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SYNPO2Q9UMS6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 AL645939.2-201ENST00000427340 991 ntBASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 TIMM8BP1-201ENST00000452384 211 ntBASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 AC027796.2-201ENST00000575326 344 ntBASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.59■□□□□ 0.73
SYNPO2Q9UMS6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SYNPO2Q9UMS6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SYNPO2Q9UMS6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SYNPO2Q9UMS6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SYNPO2Q9UMS6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SYNPO2Q9UMS6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.58■□□□□ 0.73
SYNPO2Q9UMS6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SYNPO2Q9UMS6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SYNPO2Q9UMS6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 AL139400.1-201ENST00000366220 510 ntBASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 AC093520.2-201ENST00000561830 333 ntBASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.58■□□□□ 0.72
SYNPO2Q9UMS6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 LINC01225-203ENST00000563550 1244 ntBASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SYNPO2Q9UMS6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms