Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC012569.1-201ENST00000591191 1524 ntBASIC19.27■□□□□ 0.68
COL20A1Q9P218 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
COL20A1Q9P218 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
COL20A1Q9P218 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL20A1Q9P218 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL20A1Q9P218 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.27■□□□□ 0.68
COL20A1Q9P218 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
COL20A1Q9P218 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
COL20A1Q9P218 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.27■□□□□ 0.68
COL20A1Q9P218 AC002056.1-201ENST00000395613 760 ntBASIC19.27■□□□□ 0.68
COL20A1Q9P218 KRT8P48-201ENST00000515599 1220 ntBASIC19.27■□□□□ 0.68
COL20A1Q9P218 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
COL20A1Q9P218 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.27■□□□□ 0.68
COL20A1Q9P218 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.27■□□□□ 0.68
COL20A1Q9P218 AC093520.2-201ENST00000561830 333 ntBASIC19.27■□□□□ 0.68
COL20A1Q9P218 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.27■□□□□ 0.68
COL20A1Q9P218 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL20A1Q9P218 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL20A1Q9P218 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL20A1Q9P218 LINC02012-201ENST00000608206 1725 ntBASIC19.27■□□□□ 0.68
COL20A1Q9P218 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL20A1Q9P218 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.27■□□□□ 0.68
COL20A1Q9P218 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.27■□□□□ 0.68
COL20A1Q9P218 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL20A1Q9P218 AL353732.1-201ENST00000569618 1459 ntBASIC19.27■□□□□ 0.67
COL20A1Q9P218 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
COL20A1Q9P218 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL20A1Q9P218 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COL20A1Q9P218 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
COL20A1Q9P218 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
COL20A1Q9P218 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.26■□□□□ 0.67
COL20A1Q9P218 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL20A1Q9P218 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL20A1Q9P218 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
COL20A1Q9P218 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL20A1Q9P218 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL20A1Q9P218 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.26■□□□□ 0.67
COL20A1Q9P218 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
COL20A1Q9P218 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.26■□□□□ 0.67
COL20A1Q9P218 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL20A1Q9P218 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.26■□□□□ 0.67
COL20A1Q9P218 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
COL20A1Q9P218 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL20A1Q9P218 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.26■□□□□ 0.67
COL20A1Q9P218 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.26■□□□□ 0.67
COL20A1Q9P218 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL20A1Q9P218 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.26■□□□□ 0.67
COL20A1Q9P218 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL20A1Q9P218 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL20A1Q9P218 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL20A1Q9P218 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
COL20A1Q9P218 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.26■□□□□ 0.67
COL20A1Q9P218 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL20A1Q9P218 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL20A1Q9P218 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL20A1Q9P218 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL20A1Q9P218 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL20A1Q9P218 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL20A1Q9P218 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL20A1Q9P218 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL20A1Q9P218 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL20A1Q9P218 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL20A1Q9P218 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 HMGN1P19-201ENST00000436976 333 ntBASIC19.25■□□□□ 0.67
COL20A1Q9P218 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL20A1Q9P218 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL20A1Q9P218 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL20A1Q9P218 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 AL355385.1-201ENST00000606123 409 ntBASIC19.25■□□□□ 0.67
COL20A1Q9P218 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL20A1Q9P218 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL20A1Q9P218 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.25■□□□□ 0.67
COL20A1Q9P218 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL20A1Q9P218 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.24■□□□□ 0.67
COL20A1Q9P218 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL20A1Q9P218 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL20A1Q9P218 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL20A1Q9P218 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL20A1Q9P218 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL20A1Q9P218 AL671277.1-201ENST00000429656 993 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms