Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.08■□□□□ 0.65
PDLIM7Q9NR12 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
PDLIM7Q9NR12 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDLIM7Q9NR12 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.08■□□□□ 0.65
PDLIM7Q9NR12 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDLIM7Q9NR12 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDLIM7Q9NR12 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PDLIM7Q9NR12 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PDLIM7Q9NR12 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 AC069335.1-201ENST00000489972 472 ntBASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 AL512356.2-201ENST00000546955 174 ntBASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 AIRN-201ENST00000601203 4374 ntBASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDLIM7Q9NR12 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 TUBB3P1-201ENST00000405796 1332 ntBASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 AL671277.1-201ENST00000429656 993 ntBASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 AC007274.1-201ENST00000439805 662 ntBASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 SPDYE11-202ENST00000450699 704 ntBASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 SPDYE9P-201ENST00000570642 692 ntBASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 SPDYE10P-202ENST00000612005 668 ntBASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 SPDYE8P-202ENST00000612377 668 ntBASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDLIM7Q9NR12 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 AL592309.1-201ENST00000443127 649 ntBASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 KLF2P3-201ENST00000451977 1087 ntBASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 FAM86C2P-203ENST00000528684 1004 ntBASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDLIM7Q9NR12 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 KRT18P32-201ENST00000424695 1287 ntBASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 FAM58DP-201ENST00000428076 619 ntBASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.05■□□□□ 0.64
PDLIM7Q9NR12 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms