Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
GCM1Q9NP62 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.7□□□□□ -0.06
GCM1Q9NP62 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.7□□□□□ -0.06
GCM1Q9NP62 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
GCM1Q9NP62 AC025062.2-201ENST00000605477 670 ntBASIC14.7□□□□□ -0.06
GCM1Q9NP62 AL773604.1-201ENST00000617417 272 ntBASIC14.7□□□□□ -0.06
GCM1Q9NP62 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.7□□□□□ -0.06
GCM1Q9NP62 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GCM1Q9NP62 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GCM1Q9NP62 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.7□□□□□ -0.06
GCM1Q9NP62 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GCM1Q9NP62 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GCM1Q9NP62 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.7□□□□□ -0.06
GCM1Q9NP62 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.7□□□□□ -0.06
GCM1Q9NP62 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.7□□□□□ -0.06
GCM1Q9NP62 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GCM1Q9NP62 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GCM1Q9NP62 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GCM1Q9NP62 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GCM1Q9NP62 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.7□□□□□ -0.06
GCM1Q9NP62 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
GCM1Q9NP62 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
GCM1Q9NP62 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.69□□□□□ -0.06
GCM1Q9NP62 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
GCM1Q9NP62 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
GCM1Q9NP62 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.69□□□□□ -0.06
GCM1Q9NP62 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.69□□□□□ -0.06
GCM1Q9NP62 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.69□□□□□ -0.06
GCM1Q9NP62 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
GCM1Q9NP62 SLC25A6P4-201ENST00000586535 553 ntBASIC14.69□□□□□ -0.06
GCM1Q9NP62 AC148477.8-201ENST00000624298 468 ntBASIC14.69□□□□□ -0.06
GCM1Q9NP62 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
GCM1Q9NP62 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.69□□□□□ -0.06
GCM1Q9NP62 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.69□□□□□ -0.06
GCM1Q9NP62 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
GCM1Q9NP62 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GCM1Q9NP62 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 AL135999.2-201ENST00000622438 1686 ntBASIC14.68□□□□□ -0.06
GCM1Q9NP62 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 AC068587.6-202ENST00000641839 5619 ntBASIC14.68□□□□□ -0.06
GCM1Q9NP62 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 AC097637.2-201ENST00000624096 1997 ntBASIC14.68□□□□□ -0.06
GCM1Q9NP62 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 RPS2P28-201ENST00000314255 741 ntBASIC14.68□□□□□ -0.06
GCM1Q9NP62 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 RPS2P1-201ENST00000434010 821 ntBASIC14.68□□□□□ -0.06
GCM1Q9NP62 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 FDX1P1-201ENST00000449115 551 ntBASIC14.68□□□□□ -0.06
GCM1Q9NP62 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 AL589182.2-201ENST00000619332 1049 ntBASIC14.68□□□□□ -0.06
GCM1Q9NP62 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.68□□□□□ -0.06
GCM1Q9NP62 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GCM1Q9NP62 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms