Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF3Q9HD45 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.16■□□□□ 0.34
TM9SF3Q9HD45 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.16■□□□□ 0.34
TM9SF3Q9HD45 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.16■□□□□ 0.34
TM9SF3Q9HD45 AP002472.1-201ENST00000577490 586 ntBASIC17.16■□□□□ 0.34
TM9SF3Q9HD45 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF3Q9HD45 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF3Q9HD45 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF3Q9HD45 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TM9SF3Q9HD45 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.16■□□□□ 0.34
TM9SF3Q9HD45 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF3Q9HD45 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TM9SF3Q9HD45 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF3Q9HD45 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 FAM58CP-201ENST00000435741 640 ntBASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 AC074386.1-202ENST00000463561 864 ntBASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 AC007064.4-201ENST00000637740 555 ntBASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF3Q9HD45 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.14■□□□□ 0.34
TM9SF3Q9HD45 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 AC023141.13-201ENST00000604991 943 ntBASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TM9SF3Q9HD45 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF3Q9HD45 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.13■□□□□ 0.33
TM9SF3Q9HD45 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.13■□□□□ 0.33
TM9SF3Q9HD45 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.13■□□□□ 0.33
TM9SF3Q9HD45 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF3Q9HD45 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.13■□□□□ 0.33
TM9SF3Q9HD45 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TM9SF3Q9HD45 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.13■□□□□ 0.33
TM9SF3Q9HD45 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF3Q9HD45 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF3Q9HD45 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.13■□□□□ 0.33
TM9SF3Q9HD45 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TM9SF3Q9HD45 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
TM9SF3Q9HD45 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.13■□□□□ 0.33
TM9SF3Q9HD45 ACTG1P4-201ENST00000425123 1122 ntBASIC17.13■□□□□ 0.33
TM9SF3Q9HD45 AL645939.2-201ENST00000427340 991 ntBASIC17.13■□□□□ 0.33
TM9SF3Q9HD45 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms