Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM4Q9C037 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM4Q9C037 TPSP2-201ENST00000561760 610 ntBASIC17.24■□□□□ 0.35
TRIM4Q9C037 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM4Q9C037 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRIM4Q9C037 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM4Q9C037 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM4Q9C037 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM4Q9C037 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM4Q9C037 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.24■□□□□ 0.35
TRIM4Q9C037 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM4Q9C037 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.24■□□□□ 0.35
TRIM4Q9C037 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM4Q9C037 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM4Q9C037 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM4Q9C037 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM4Q9C037 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
TRIM4Q9C037 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM4Q9C037 AC009102.3-201ENST00000623118 1491 ntBASIC17.24■□□□□ 0.35
TRIM4Q9C037 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM4Q9C037 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM4Q9C037 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRIM4Q9C037 IL9RP2-201ENST00000423948 1312 ntBASIC17.23■□□□□ 0.35
TRIM4Q9C037 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 KRT8P7-201ENST00000533003 1432 ntBASIC17.23■□□□□ 0.35
TRIM4Q9C037 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.23■□□□□ 0.35
TRIM4Q9C037 PCDHB17P-201ENST00000539533 2393 ntBASIC17.23■□□□□ 0.35
TRIM4Q9C037 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRIM4Q9C037 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM4Q9C037 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM4Q9C037 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM4Q9C037 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM4Q9C037 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
TRIM4Q9C037 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
TRIM4Q9C037 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM4Q9C037 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRIM4Q9C037 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM4Q9C037 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM4Q9C037 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM4Q9C037 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM4Q9C037 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM4Q9C037 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM4Q9C037 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM4Q9C037 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM4Q9C037 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.22■□□□□ 0.35
TRIM4Q9C037 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRIM4Q9C037 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM4Q9C037 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM4Q9C037 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM4Q9C037 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM4Q9C037 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM4Q9C037 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM4Q9C037 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.22■□□□□ 0.35
TRIM4Q9C037 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.22■□□□□ 0.35
TRIM4Q9C037 AC104390.1-201ENST00000555663 520 ntBASIC17.22■□□□□ 0.35
TRIM4Q9C037 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.22■□□□□ 0.35
TRIM4Q9C037 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM4Q9C037 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRIM4Q9C037 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.22■□□□□ 0.35
TRIM4Q9C037 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms