Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 MPDU1-223ENST00000582151 728 ntBASIC22.04■■□□□ 1.12
PCDH11XQ9BZA7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 AL354751.1-201ENST00000412768 1863 ntBASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 AL138918.1-201ENST00000568306 659 ntBASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDH11XQ9BZA7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
PCDH11XQ9BZA7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH11XQ9BZA7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH11XQ9BZA7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC22.02■■□□□ 1.12
PCDH11XQ9BZA7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH11XQ9BZA7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH11XQ9BZA7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH11XQ9BZA7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDH11XQ9BZA7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH11XQ9BZA7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH11XQ9BZA7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDH11XQ9BZA7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC22.02■■□□□ 1.12
PCDH11XQ9BZA7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC22.02■■□□□ 1.12
PCDH11XQ9BZA7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC22.02■■□□□ 1.12
PCDH11XQ9BZA7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDH11XQ9BZA7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDH11XQ9BZA7 AC073592.8-201ENST00000624126 511 ntBASIC22.02■■□□□ 1.12
PCDH11XQ9BZA7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
PCDH11XQ9BZA7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PCDH11XQ9BZA7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 MRPS18AP1-201ENST00000414458 589 ntBASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 SERBP1P5-201ENST00000510079 1181 ntBASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 AC105233.2-201ENST00000523697 349 ntBASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 AF228730.5-201ENST00000530288 346 ntBASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDH11XQ9BZA7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 AC087289.5-201ENST00000586076 3175 ntBASIC22■■□□□ 1.11
PCDH11XQ9BZA7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 LINC00895-201ENST00000629028 1637 ntBASIC22■■□□□ 1.11
PCDH11XQ9BZA7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 AC100757.3-201ENST00000622361 1406 ntBASIC22■■□□□ 1.11
PCDH11XQ9BZA7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDH11XQ9BZA7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH11XQ9BZA7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
PCDH11XQ9BZA7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms