Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 AC104076.2-201ENST00000448912 469 ntBASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 VENTXP7-201ENST00000475503 772 ntBASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 KRT8P26-201ENST00000534154 1276 ntBASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
SHANK2-AS3Q9BTD1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 TUBB8P12-201ENST00000308911 1335 ntBASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 TUBB7P-202ENST00000428444 1305 ntBASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 TUBB8P7-204ENST00000567960 1332 ntBASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 AC132938.5-201ENST00000624980 1813 ntBASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SHANK2-AS3Q9BTD1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 AL136038.3-201ENST00000561909 1096 ntBASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 AC011467.2-201ENST00000598425 242 ntBASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 LINC01023-201ENST00000606054 436 ntBASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.21□□□□□ -0.29
SHANK2-AS3Q9BTD1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms