Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RNF2Q99496 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF2Q99496 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF2Q99496 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF2Q99496 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.72□□□□□ -0.21
RNF2Q99496 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.72□□□□□ -0.21
RNF2Q99496 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF2Q99496 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.72□□□□□ -0.21
RNF2Q99496 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RNF2Q99496 AC083849.1-201ENST00000615227 514 ntBASIC13.72□□□□□ -0.21
RNF2Q99496 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RNF2Q99496 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
RNF2Q99496 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 AC105020.1-201ENST00000435356 2205 ntBASIC13.72□□□□□ -0.21
RNF2Q99496 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF2Q99496 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF2Q99496 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RNF2Q99496 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 LYSMD4-203ENST00000378904 2122 ntBASIC13.72□□□□□ -0.21
RNF2Q99496 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF2Q99496 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF2Q99496 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RNF2Q99496 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
RNF2Q99496 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
RNF2Q99496 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF2Q99496 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RNF2Q99496 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RNF2Q99496 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF2Q99496 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
RNF2Q99496 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.71□□□□□ -0.21
RNF2Q99496 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 MIR662-201ENST00000384847 95 ntBASIC13.71□□□□□ -0.21
RNF2Q99496 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF2Q99496 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF2Q99496 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.71□□□□□ -0.21
RNF2Q99496 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF2Q99496 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.71□□□□□ -0.21
RNF2Q99496 AP003733.1-201ENST00000491725 852 ntBASIC13.71□□□□□ -0.21
RNF2Q99496 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
RNF2Q99496 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.71□□□□□ -0.21
RNF2Q99496 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.71□□□□□ -0.21
RNF2Q99496 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RNF2Q99496 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RNF2Q99496 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RNF2Q99496 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RNF2Q99496 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.21
RNF2Q99496 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RNF2Q99496 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RNF2Q99496 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.71□□□□□ -0.22
RNF2Q99496 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.71□□□□□ -0.22
RNF2Q99496 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.71□□□□□ -0.22
RNF2Q99496 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
RNF2Q99496 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.71□□□□□ -0.22
RNF2Q99496 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.71□□□□□ -0.22
RNF2Q99496 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RNF2Q99496 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RNF2Q99496 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF2Q99496 AGGF1P2-201ENST00000426656 2106 ntBASIC13.7□□□□□ -0.22
RNF2Q99496 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF2Q99496 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF2Q99496 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RNF2Q99496 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RNF2Q99496 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.7□□□□□ -0.22
RNF2Q99496 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.7□□□□□ -0.22
RNF2Q99496 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms