Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CDK5RAP1Q96SZ6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 YBX2P1-201ENST00000394192 760 ntBASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 AC023274.1-201ENST00000418278 595 ntBASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 PDPK2P-202ENST00000562415 1191 ntBASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 AC018845.2-201ENST00000568326 409 ntBASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 AC005412.3-201ENST00000580309 715 ntBASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 AC004877.2-201ENST00000623941 599 ntBASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.75■□□□□ 0.43
CDK5RAP1Q96SZ6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 BCAR1-209ENST00000546196 1340 ntBASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 AC067852.2-201ENST00000590513 2313 ntBASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 AC124947.2-201ENST00000547118 1133 ntBASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 CROCCP2-202ENST00000412962 2773 ntBASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 AL021920.2-201ENST00000624828 1351 ntBASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDK5RAP1Q96SZ6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 LINC02012-201ENST00000608206 1725 ntBASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDK5RAP1Q96SZ6 AL513480.1-201ENST00000451731 511 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms