Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 AC013268.4-201ENST00000637413 2228 ntBASIC16.2■□□□□ 0.18
NR1H4Q96RI1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NR1H4Q96RI1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 AC138035.3-201ENST00000622706 2791 ntBASIC16.19■□□□□ 0.18
NR1H4Q96RI1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.19■□□□□ 0.18
NR1H4Q96RI1 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 AP003097.1-201ENST00000530657 1135 ntBASIC16.18■□□□□ 0.18
NR1H4Q96RI1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 AC008403.3-201ENST00000598924 454 ntBASIC16.18■□□□□ 0.18
NR1H4Q96RI1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NR1H4Q96RI1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NR1H4Q96RI1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms