Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 AC117500.6-201ENST00000624871 588 ntBASIC14.26□□□□□ -0.13
GAFA1Q96PS6 AC005593.1-201ENST00000624894 515 ntBASIC14.26□□□□□ -0.13
GAFA1Q96PS6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.26□□□□□ -0.13
GAFA1Q96PS6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 AC080080.1-201ENST00000625121 2420 ntBASIC14.26□□□□□ -0.13
GAFA1Q96PS6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 PI4KAP1-204ENST00000612579 1703 ntBASIC14.26□□□□□ -0.13
GAFA1Q96PS6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
GAFA1Q96PS6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 AC098831.1-202ENST00000438821 336 ntBASIC14.25□□□□□ -0.13
GAFA1Q96PS6 PAWRP1-201ENST00000451083 565 ntBASIC14.25□□□□□ -0.13
GAFA1Q96PS6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 AC116407.3-201ENST00000623905 1129 ntBASIC14.25□□□□□ -0.13
GAFA1Q96PS6 PGM5P2-202ENST00000637225 1043 ntBASIC14.25□□□□□ -0.13
GAFA1Q96PS6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAFA1Q96PS6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 LTB4R2-202ENST00000528054 3092 ntBASIC14.24□□□□□ -0.13
GAFA1Q96PS6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 AC092068.3-201ENST00000587894 2016 ntBASIC14.24□□□□□ -0.13
GAFA1Q96PS6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
GAFA1Q96PS6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms