Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 RNA5SP421-201ENST00000516864 134 ntBASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 AC015911.4-201ENST00000588022 1070 ntBASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 AL133373.2-201ENST00000623187 2828 ntBASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC46A1Q96NT5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 LINC00304-203ENST00000565008 1864 ntBASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 AC133963.1-201ENST00000504166 1679 ntBASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SLC46A1Q96NT5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 AL355312.1-201ENST00000407115 2176 ntBASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 AC002056.1-201ENST00000395613 760 ntBASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.36■□□□□ 0.21
SLC46A1Q96NT5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC46A1Q96NT5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC46A1Q96NT5 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC46A1Q96NT5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC46A1Q96NT5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SLC46A1Q96NT5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC46A1Q96NT5 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.35■□□□□ 0.21
SLC46A1Q96NT5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.35■□□□□ 0.21
SLC46A1Q96NT5 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.35■□□□□ 0.21
SLC46A1Q96NT5 ADH5P3-201ENST00000433842 1137 ntBASIC16.35■□□□□ 0.21
SLC46A1Q96NT5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.35■□□□□ 0.21
SLC46A1Q96NT5 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC46A1Q96NT5 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC46A1Q96NT5 AC067863.1-201ENST00000494933 530 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms