Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AC007613.1-201ENST00000572811 2597 ntBASIC19.9■□□□□ 0.78
CCDC17Q96LX7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.89■□□□□ 0.78
CCDC17Q96LX7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC17Q96LX7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.89■□□□□ 0.78
CCDC17Q96LX7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC17Q96LX7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 AC004461.1-201ENST00000412461 403 ntBASIC19.89■□□□□ 0.77
CCDC17Q96LX7 AL355306.1-201ENST00000415580 579 ntBASIC19.89■□□□□ 0.77
CCDC17Q96LX7 METTL21AP1-201ENST00000438852 635 ntBASIC19.89■□□□□ 0.77
CCDC17Q96LX7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 AC022145.2-201ENST00000598203 171 ntBASIC19.89■□□□□ 0.77
CCDC17Q96LX7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC17Q96LX7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 KRT8P49-201ENST00000604166 1432 ntBASIC19.88■□□□□ 0.77
CCDC17Q96LX7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 AC124947.2-201ENST00000547118 1133 ntBASIC19.88■□□□□ 0.77
CCDC17Q96LX7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 AC027612.4-201ENST00000605371 583 ntBASIC19.88■□□□□ 0.77
CCDC17Q96LX7 AC026120.1-201ENST00000611536 926 ntBASIC19.88■□□□□ 0.77
CCDC17Q96LX7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 AL161645.1-201ENST00000622716 1255 ntBASIC19.88■□□□□ 0.77
CCDC17Q96LX7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCDC17Q96LX7 LINC02012-201ENST00000608206 1725 ntBASIC19.88■□□□□ 0.77
CCDC17Q96LX7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 AC109635.5-201ENST00000533593 962 ntBASIC19.87■□□□□ 0.77
CCDC17Q96LX7 AC087641.1-201ENST00000557561 1021 ntBASIC19.87■□□□□ 0.77
CCDC17Q96LX7 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 AL009183.1-201ENST00000603760 355 ntBASIC19.87■□□□□ 0.77
CCDC17Q96LX7 AP001350.2-201ENST00000625104 1094 ntBASIC19.87■□□□□ 0.77
CCDC17Q96LX7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 SLC22A20-204ENST00000530038 1673 ntBASIC19.87■□□□□ 0.77
CCDC17Q96LX7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 CROCCP2-202ENST00000412962 2773 ntBASIC19.87■□□□□ 0.77
CCDC17Q96LX7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC17Q96LX7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC17Q96LX7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms