Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18■□□□□ 0.47
SMARCD1Q96GM5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SMARCD1Q96GM5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18■□□□□ 0.47
SMARCD1Q96GM5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SMARCD1Q96GM5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SMARCD1Q96GM5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 FAM185BP-201ENST00000443595 716 ntBASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 AC107918.2-201ENST00000530817 355 ntBASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 AC124947.2-201ENST00000547118 1133 ntBASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 AC002347.1-201ENST00000569543 541 ntBASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.99■□□□□ 0.47
SMARCD1Q96GM5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 BX842568.4-201ENST00000421222 227 ntBASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 RHOQP3-201ENST00000437982 621 ntBASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 ACTL9-202ENST00000612068 1252 ntBASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.98■□□□□ 0.47
SMARCD1Q96GM5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 AC023274.1-201ENST00000418278 595 ntBASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SMARCD1Q96GM5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms