Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.17■□□□□ 0.34
SIPA1Q96FS4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SIPA1Q96FS4 AC004449.1-201ENST00000564240 433 ntBASIC17.17■□□□□ 0.34
SIPA1Q96FS4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.17■□□□□ 0.34
SIPA1Q96FS4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.17■□□□□ 0.34
SIPA1Q96FS4 AC093028.1-201ENST00000622998 982 ntBASIC17.17■□□□□ 0.34
SIPA1Q96FS4 AL645728.2-201ENST00000641974 660 ntBASIC17.17■□□□□ 0.34
SIPA1Q96FS4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SIPA1Q96FS4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIPA1Q96FS4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIPA1Q96FS4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.17■□□□□ 0.34
SIPA1Q96FS4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SIPA1Q96FS4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SIPA1Q96FS4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.17■□□□□ 0.34
SIPA1Q96FS4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIPA1Q96FS4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIPA1Q96FS4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SIPA1Q96FS4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SIPA1Q96FS4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SIPA1Q96FS4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.16■□□□□ 0.34
SIPA1Q96FS4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 AC022145.2-201ENST00000598203 171 ntBASIC17.16■□□□□ 0.34
SIPA1Q96FS4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SIPA1Q96FS4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 AL139400.1-201ENST00000366220 510 ntBASIC17.15■□□□□ 0.34
SIPA1Q96FS4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 SLC25A6P5-201ENST00000435663 894 ntBASIC17.15■□□□□ 0.34
SIPA1Q96FS4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 AC107918.2-201ENST00000530817 355 ntBASIC17.15■□□□□ 0.34
SIPA1Q96FS4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.15■□□□□ 0.34
SIPA1Q96FS4 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 AL354751.1-201ENST00000412768 1863 ntBASIC17.15■□□□□ 0.34
SIPA1Q96FS4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 AL355312.1-201ENST00000407115 2176 ntBASIC17.15■□□□□ 0.34
SIPA1Q96FS4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.15■□□□□ 0.34
SIPA1Q96FS4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
SIPA1Q96FS4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SIPA1Q96FS4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.14■□□□□ 0.33
SIPA1Q96FS4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SIPA1Q96FS4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms