Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.78□□□□□ -0.36
RNF183Q96D59 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.78□□□□□ -0.36
RNF183Q96D59 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.78□□□□□ -0.36
RNF183Q96D59 AC100803.2-201ENST00000562459 1963 ntBASIC12.78□□□□□ -0.36
RNF183Q96D59 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.78□□□□□ -0.36
RNF183Q96D59 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RNF183Q96D59 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.78□□□□□ -0.36
RNF183Q96D59 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.78□□□□□ -0.36
RNF183Q96D59 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
RNF183Q96D59 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.78□□□□□ -0.36
RNF183Q96D59 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.78□□□□□ -0.36
RNF183Q96D59 SPDYE21P-201ENST00000413323 827 ntBASIC12.78□□□□□ -0.36
RNF183Q96D59 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.78□□□□□ -0.36
RNF183Q96D59 AL020989.1-201ENST00000422979 469 ntBASIC12.78□□□□□ -0.36
RNF183Q96D59 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.78□□□□□ -0.36
RNF183Q96D59 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.78□□□□□ -0.36
RNF183Q96D59 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.78□□□□□ -0.36
RNF183Q96D59 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.78□□□□□ -0.36
RNF183Q96D59 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.78□□□□□ -0.36
RNF183Q96D59 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.78□□□□□ -0.36
RNF183Q96D59 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.78□□□□□ -0.36
RNF183Q96D59 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.78□□□□□ -0.36
RNF183Q96D59 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.78□□□□□ -0.36
RNF183Q96D59 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.78□□□□□ -0.36
RNF183Q96D59 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 AL049840.3-201ENST00000602669 611 ntBASIC12.78□□□□□ -0.36
RNF183Q96D59 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.78□□□□□ -0.36
RNF183Q96D59 AC116407.3-201ENST00000623905 1129 ntBASIC12.78□□□□□ -0.36
RNF183Q96D59 AC107918.4-202ENST00000641623 219 ntBASIC12.78□□□□□ -0.36
RNF183Q96D59 AF228730.7-201ENST00000641842 219 ntBASIC12.78□□□□□ -0.36
RNF183Q96D59 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
RNF183Q96D59 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RNF183Q96D59 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RNF183Q96D59 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 AC009949.1-201ENST00000623048 1830 ntBASIC12.78□□□□□ -0.36
RNF183Q96D59 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RNF183Q96D59 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.78□□□□□ -0.36
RNF183Q96D59 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
RNF183Q96D59 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RNF183Q96D59 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 KRT18P55-202ENST00000578578 1546 ntBASIC12.78□□□□□ -0.36
RNF183Q96D59 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
RNF183Q96D59 AL049757.1-201ENST00000616842 1596 ntBASIC12.77□□□□□ -0.36
RNF183Q96D59 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
RNF183Q96D59 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
RNF183Q96D59 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RNF183Q96D59 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.77□□□□□ -0.36
RNF183Q96D59 PCDHA1-201ENST00000378133 2726 ntBASIC12.77□□□□□ -0.36
RNF183Q96D59 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
RNF183Q96D59 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RNF183Q96D59 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
RNF183Q96D59 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RNF183Q96D59 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RNF183Q96D59 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RNF183Q96D59 TCAF2P1-201ENST00000291129 2421 ntBASIC12.77□□□□□ -0.37
RNF183Q96D59 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.77□□□□□ -0.37
RNF183Q96D59 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.77□□□□□ -0.37
RNF183Q96D59 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RNF183Q96D59 AC003669.1-201ENST00000334569 611 ntBASIC12.77□□□□□ -0.37
RNF183Q96D59 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
RNF183Q96D59 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.77□□□□□ -0.37
RNF183Q96D59 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.77□□□□□ -0.37
RNF183Q96D59 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.77□□□□□ -0.37
RNF183Q96D59 LAGE3P1-201ENST00000425356 484 ntBASIC12.77□□□□□ -0.37
RNF183Q96D59 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.77□□□□□ -0.37
RNF183Q96D59 BX005266.1-201ENST00000473402 457 ntBASIC12.77□□□□□ -0.37
RNF183Q96D59 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.77□□□□□ -0.37
RNF183Q96D59 IGHV3-52-201ENST00000519770 353 ntBASIC12.77□□□□□ -0.37
RNF183Q96D59 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RNF183Q96D59 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RNF183Q96D59 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.77□□□□□ -0.37
RNF183Q96D59 AC008735.5-201ENST00000623544 497 ntBASIC12.77□□□□□ -0.37
RNF183Q96D59 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.77□□□□□ -0.37
RNF183Q96D59 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RNF183Q96D59 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.77□□□□□ -0.37
RNF183Q96D59 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
RNF183Q96D59 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RNF183Q96D59 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms