Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 AC002558.1-201ENST00000488906 803 ntBASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 KRT18P58-201ENST00000527480 1120 ntBASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 AL589182.2-201ENST00000619332 1049 ntBASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 MIR1199-201ENST00000621445 119 ntBASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 AL645608.8-201ENST00000606034 2086 ntBASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 AC092910.1-201ENST00000482027 1129 ntBASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 AC133963.1-201ENST00000504166 1679 ntBASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SH3KBP1Q96B97 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 AC141586.5-201ENST00000624546 2050 ntBASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 LINC00304-203ENST00000565008 1864 ntBASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 MIR574-201ENST00000385209 96 ntBASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 AC019129.2-201ENST00000609837 1235 ntBASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SH3KBP1Q96B97 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SH3KBP1Q96B97 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
SH3KBP1Q96B97 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SH3KBP1Q96B97 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SH3KBP1Q96B97 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SH3KBP1Q96B97 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SH3KBP1Q96B97 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
SH3KBP1Q96B97 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.02■□□□□ 0.31
SH3KBP1Q96B97 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SH3KBP1Q96B97 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms