Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.7■□□□□ 0.26
NCLNQ969V3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCLNQ969V3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCLNQ969V3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NCLNQ969V3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.7■□□□□ 0.26
NCLNQ969V3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NCLNQ969V3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NCLNQ969V3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NCLNQ969V3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NCLNQ969V3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.7■□□□□ 0.26
NCLNQ969V3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
NCLNQ969V3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.7■□□□□ 0.26
NCLNQ969V3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCLNQ969V3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NCLNQ969V3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NCLNQ969V3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.7■□□□□ 0.26
NCLNQ969V3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.7■□□□□ 0.26
NCLNQ969V3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.7■□□□□ 0.26
NCLNQ969V3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.7■□□□□ 0.26
NCLNQ969V3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCLNQ969V3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NCLNQ969V3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NCLNQ969V3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.7■□□□□ 0.26
NCLNQ969V3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCLNQ969V3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCLNQ969V3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NCLNQ969V3 NSUN5P1-202ENST00000421140 1535 ntBASIC16.7■□□□□ 0.26
NCLNQ969V3 NSUN5P2-203ENST00000457352 1529 ntBASIC16.7■□□□□ 0.26
NCLNQ969V3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NCLNQ969V3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.7■□□□□ 0.26
NCLNQ969V3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCLNQ969V3 UBALD1-205ENST00000590891 2641 ntBASIC16.69■□□□□ 0.26
NCLNQ969V3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NCLNQ969V3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NCLNQ969V3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.69■□□□□ 0.26
NCLNQ969V3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
NCLNQ969V3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
NCLNQ969V3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 IGHV3-47-201ENST00000425060 335 ntBASIC16.69■□□□□ 0.26
NCLNQ969V3 MINOS1P3-201ENST00000457048 203 ntBASIC16.69■□□□□ 0.26
NCLNQ969V3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.69■□□□□ 0.26
NCLNQ969V3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.69■□□□□ 0.26
NCLNQ969V3 AC099336.1-202ENST00000602961 463 ntBASIC16.69■□□□□ 0.26
NCLNQ969V3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NCLNQ969V3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.69■□□□□ 0.26
NCLNQ969V3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.69■□□□□ 0.26
NCLNQ969V3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.69■□□□□ 0.26
NCLNQ969V3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NCLNQ969V3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
NCLNQ969V3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NCLNQ969V3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCLNQ969V3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NCLNQ969V3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.68■□□□□ 0.26
NCLNQ969V3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.68■□□□□ 0.26
NCLNQ969V3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NCLNQ969V3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NCLNQ969V3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.68■□□□□ 0.26
NCLNQ969V3 NUS1P1-201ENST00000446295 882 ntBASIC16.68■□□□□ 0.26
NCLNQ969V3 FOSL1P1-201ENST00000511041 816 ntBASIC16.68■□□□□ 0.26
NCLNQ969V3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.68■□□□□ 0.26
NCLNQ969V3 AC005336.2-201ENST00000593183 939 ntBASIC16.68■□□□□ 0.26
NCLNQ969V3 AC138894.3-201ENST00000603787 634 ntBASIC16.68■□□□□ 0.26
NCLNQ969V3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.68■□□□□ 0.26
NCLNQ969V3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.68■□□□□ 0.26
NCLNQ969V3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NCLNQ969V3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCLNQ969V3 AC068587.6-202ENST00000641839 5619 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms