Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CASKIN1Q8WXD9 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CASKIN1Q8WXD9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
CASKIN1Q8WXD9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 BAD-202ENST00000394531 631 ntTSL 3 BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 BAD-207ENST00000544785 525 ntTSL 3 BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 AL158211.3-201ENST00000607385 239 ntBASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 AC021097.1-201ENST00000607902 574 ntBASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 CROCCP2-202ENST00000412962 2773 ntBASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC26.34■■□□□ 1.81
CASKIN1Q8WXD9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CASKIN1Q8WXD9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CASKIN1Q8WXD9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC26.33■■□□□ 1.81
CASKIN1Q8WXD9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CASKIN1Q8WXD9 MIR661-201ENST00000384842 89 ntBASIC26.33■■□□□ 1.81
CASKIN1Q8WXD9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC26.33■■□□□ 1.81
CASKIN1Q8WXD9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC26.33■■□□□ 1.81
CASKIN1Q8WXD9 STARD13-205ENST00000439831 945 ntTSL 2 BASIC26.33■■□□□ 1.81
CASKIN1Q8WXD9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CASKIN1Q8WXD9 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
CASKIN1Q8WXD9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC26.33■■□□□ 1.81
CASKIN1Q8WXD9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CASKIN1Q8WXD9 AL138918.1-201ENST00000568306 659 ntBASIC26.33■■□□□ 1.81
CASKIN1Q8WXD9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC26.33■■□□□ 1.81
CASKIN1Q8WXD9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CASKIN1Q8WXD9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
CASKIN1Q8WXD9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CASKIN1Q8WXD9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
CASKIN1Q8WXD9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
CASKIN1Q8WXD9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CASKIN1Q8WXD9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CASKIN1Q8WXD9 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC26.32■■□□□ 1.8
CASKIN1Q8WXD9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC26.32■■□□□ 1.8
CASKIN1Q8WXD9 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CASKIN1Q8WXD9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC26.32■■□□□ 1.8
CASKIN1Q8WXD9 MIR6080-201ENST00000617359 66 ntBASIC26.32■■□□□ 1.8
CASKIN1Q8WXD9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CASKIN1Q8WXD9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC26.32■■□□□ 1.8
CASKIN1Q8WXD9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CASKIN1Q8WXD9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 SPDYE7P-202ENST00000420373 878 ntBASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 NAA60-208ENST00000570819 833 ntTSL 2 BASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 FO538757.1-201ENST00000623083 1397 ntBASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 AC092580.3-201ENST00000430932 139 ntBASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 AC105233.2-201ENST00000523697 349 ntBASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 AF228730.5-201ENST00000530288 346 ntBASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 AC013467.2-201ENST00000605472 835 ntBASIC26.31■■□□□ 1.8
CASKIN1Q8WXD9 AC120498.9-201ENST00000339021 3867 ntBASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 TREML5P-201ENST00000421694 576 ntBASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC26.3■■□□□ 1.8
CASKIN1Q8WXD9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms