Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 AC073592.4-201ENST00000623827 446 ntBASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.1■□□□□ 0.81
SMARCC2Q8TAQ2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 FLJ38576-201ENST00000623820 2459 ntBASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 MTDHP4-201ENST00000600287 670 ntBASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMARCC2Q8TAQ2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMARCC2Q8TAQ2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
SMARCC2Q8TAQ2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMARCC2Q8TAQ2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.81
SMARCC2Q8TAQ2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SMARCC2Q8TAQ2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SMARCC2Q8TAQ2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SMARCC2Q8TAQ2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SMARCC2Q8TAQ2 AL020989.1-201ENST00000422979 469 ntBASIC20.08■□□□□ 0.81
SMARCC2Q8TAQ2 RPS2P1-201ENST00000434010 821 ntBASIC20.08■□□□□ 0.81
SMARCC2Q8TAQ2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.08■□□□□ 0.81
SMARCC2Q8TAQ2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
SMARCC2Q8TAQ2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMARCC2Q8TAQ2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.08■□□□□ 0.81
SMARCC2Q8TAQ2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SMARCC2Q8TAQ2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMARCC2Q8TAQ2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMARCC2Q8TAQ2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SMARCC2Q8TAQ2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMARCC2Q8TAQ2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMARCC2Q8TAQ2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMARCC2Q8TAQ2 AC004817.3-201ENST00000602957 2129 ntBASIC20.08■□□□□ 0.8
SMARCC2Q8TAQ2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.08■□□□□ 0.8
SMARCC2Q8TAQ2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SMARCC2Q8TAQ2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SMARCC2Q8TAQ2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 AC078925.2-201ENST00000624013 1973 ntBASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 HNRNPDP1-201ENST00000439535 754 ntBASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.07■□□□□ 0.8
SMARCC2Q8TAQ2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms