Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL9Q8NET4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL9Q8NET4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.99■□□□□ 0.95
RTL9Q8NET4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RTL9Q8NET4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RTL9Q8NET4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RTL9Q8NET4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTL9Q8NET4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTL9Q8NET4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTL9Q8NET4 COX20P2-201ENST00000452636 358 ntBASIC20.98■□□□□ 0.95
RTL9Q8NET4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.98■□□□□ 0.95
RTL9Q8NET4 AC079140.1-201ENST00000508039 487 ntBASIC20.98■□□□□ 0.95
RTL9Q8NET4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.98■□□□□ 0.95
RTL9Q8NET4 AC243562.1-201ENST00000560672 389 ntBASIC20.98■□□□□ 0.95
RTL9Q8NET4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.98■□□□□ 0.95
RTL9Q8NET4 AL161645.1-201ENST00000622716 1255 ntBASIC20.98■□□□□ 0.95
RTL9Q8NET4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTL9Q8NET4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTL9Q8NET4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTL9Q8NET4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTL9Q8NET4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTL9Q8NET4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTL9Q8NET4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.98■□□□□ 0.95
RTL9Q8NET4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.98■□□□□ 0.95
RTL9Q8NET4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RTL9Q8NET4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTL9Q8NET4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.98■□□□□ 0.95
RTL9Q8NET4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTL9Q8NET4 FRMD8P1-201ENST00000440433 1524 ntBASIC20.98■□□□□ 0.95
RTL9Q8NET4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RTL9Q8NET4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTL9Q8NET4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.98■□□□□ 0.95
RTL9Q8NET4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.98■□□□□ 0.95
RTL9Q8NET4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTL9Q8NET4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RTL9Q8NET4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RTL9Q8NET4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTL9Q8NET4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTL9Q8NET4 RNU1-129P-201ENST00000384064 167 ntBASIC20.97■□□□□ 0.95
RTL9Q8NET4 TFAMP1-201ENST00000412727 736 ntBASIC20.97■□□□□ 0.95
RTL9Q8NET4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.97■□□□□ 0.95
RTL9Q8NET4 SPDYE11-202ENST00000450699 704 ntBASIC20.97■□□□□ 0.95
RTL9Q8NET4 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.97■□□□□ 0.95
RTL9Q8NET4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.97■□□□□ 0.95
RTL9Q8NET4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RTL9Q8NET4 SPDYE9P-201ENST00000570642 692 ntBASIC20.97■□□□□ 0.95
RTL9Q8NET4 U1.21-201ENST00000580816 167 ntBASIC20.97■□□□□ 0.95
RTL9Q8NET4 AL390955.2-201ENST00000603032 514 ntBASIC20.97■□□□□ 0.95
RTL9Q8NET4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTL9Q8NET4 SPDYE10P-202ENST00000612005 668 ntBASIC20.97■□□□□ 0.95
RTL9Q8NET4 SPDYE8P-202ENST00000612377 668 ntBASIC20.97■□□□□ 0.95
RTL9Q8NET4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.97■□□□□ 0.95
RTL9Q8NET4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTL9Q8NET4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTL9Q8NET4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RTL9Q8NET4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTL9Q8NET4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTL9Q8NET4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTL9Q8NET4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.97■□□□□ 0.95
RTL9Q8NET4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.97■□□□□ 0.95
RTL9Q8NET4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTL9Q8NET4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTL9Q8NET4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTL9Q8NET4 GNAS-203ENST00000306120 1878 ntBASIC20.97■□□□□ 0.95
RTL9Q8NET4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.97■□□□□ 0.95
RTL9Q8NET4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTL9Q8NET4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.97■□□□□ 0.95
RTL9Q8NET4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.97■□□□□ 0.95
RTL9Q8NET4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTL9Q8NET4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
RTL9Q8NET4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RTL9Q8NET4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RTL9Q8NET4 LINC00628-201ENST00000628516 1289 ntBASIC20.97■□□□□ 0.95
RTL9Q8NET4 AC084121.4-201ENST00000641598 221 ntBASIC20.97■□□□□ 0.95
RTL9Q8NET4 AF228730.8-201ENST00000642140 221 ntBASIC20.97■□□□□ 0.95
RTL9Q8NET4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTL9Q8NET4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTL9Q8NET4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.96■□□□□ 0.95
RTL9Q8NET4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC20.96■□□□□ 0.95
RTL9Q8NET4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTL9Q8NET4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.96■□□□□ 0.95
RTL9Q8NET4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTL9Q8NET4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTL9Q8NET4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RTL9Q8NET4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTL9Q8NET4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RTL9Q8NET4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTL9Q8NET4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.96■□□□□ 0.95
RTL9Q8NET4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTL9Q8NET4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTL9Q8NET4 AC092474.2-201ENST00000424288 719 ntBASIC20.96■□□□□ 0.95
RTL9Q8NET4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTL9Q8NET4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTL9Q8NET4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.96■□□□□ 0.95
RTL9Q8NET4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTL9Q8NET4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RTL9Q8NET4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
RTL9Q8NET4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTL9Q8NET4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.95■□□□□ 0.94
RTL9Q8NET4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms