Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 AC092329.2-201ENST00000598402 547 ntBASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 AC092119.3-201ENST00000612618 583 ntBASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 AC114341.1-201ENST00000618070 349 ntBASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 AL139384.1-201ENST00000612143 3047 ntBASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 AC009336.1-201ENST00000608941 1553 ntBASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ZNF439Q8NDP4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 AC003669.1-201ENST00000334569 611 ntBASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 AC104819.1-201ENST00000504587 486 ntBASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF439Q8NDP4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 AC093525.9-201ENST00000624961 1746 ntBASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 AL121761.2-201ENST00000598007 1648 ntBASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 POM121L3P-201ENST00000419331 1163 ntBASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ZNF439Q8NDP4 STK19B-204ENST00000512515 211 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms