Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
HMCN2Q8NDA2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
HMCN2Q8NDA2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 AKR7A2P1-201ENST00000460134 915 ntBASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 AC091804.1-201ENST00000486888 567 ntBASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 MTRF1LP2-201ENST00000506027 1122 ntBASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC9.4□□□□□ -0.9
HMCN2Q8NDA2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
HMCN2Q8NDA2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
HMCN2Q8NDA2 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC9.4□□□□□ -0.91
HMCN2Q8NDA2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
HMCN2Q8NDA2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC9.4□□□□□ -0.91
HMCN2Q8NDA2 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC9.4□□□□□ -0.91
HMCN2Q8NDA2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC9.4□□□□□ -0.91
HMCN2Q8NDA2 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
HMCN2Q8NDA2 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
HMCN2Q8NDA2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC9.4□□□□□ -0.91
HMCN2Q8NDA2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
HMCN2Q8NDA2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
HMCN2Q8NDA2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
HMCN2Q8NDA2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
HMCN2Q8NDA2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 AL591846.1-201ENST00000451736 433 ntBASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 MAGEA5-201ENST00000446757 942 ntBASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 AC093010.1-201ENST00000473625 1624 ntBASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 SOCS2P1-201ENST00000417727 557 ntBASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 RN7SL818P-201ENST00000485099 259 ntBASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC9.39□□□□□ -0.91
HMCN2Q8NDA2 RN7SL725P-201ENST00000606439 259 ntBASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms