Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 ZNF259P1-201ENST00000407656 1365 ntBASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 Z83851.2-201ENST00000609564 659 ntBASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDH20Q8N6Y1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 AC124067.4-201ENST00000519691 2379 ntBASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 UNC93B6-202ENST00000528242 690 ntBASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 AL805961.1-202ENST00000641562 540 ntBASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 AC104109.2-201ENST00000602919 1418 ntBASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH20Q8N6Y1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 AD000864.1-201ENST00000624076 2295 ntBASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH20Q8N6Y1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms