Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAM1L1Q8N609 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAM1L1Q8N609 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAM1L1Q8N609 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAM1L1Q8N609 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRAM1L1Q8N609 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAM1L1Q8N609 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAM1L1Q8N609 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAM1L1Q8N609 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAM1L1Q8N609 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAM1L1Q8N609 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAM1L1Q8N609 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAM1L1Q8N609 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAM1L1Q8N609 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAM1L1Q8N609 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 AC092053.1-201ENST00000605787 1936 ntBASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 AC002310.6-201ENST00000624451 1377 ntBASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 AP000347.1-202ENST00000435868 847 ntBASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAM1L1Q8N609 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 DUX4L17-201ENST00000557360 1267 ntBASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 AC027601.4-201ENST00000611259 610 ntBASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 AC129492.6-201ENST00000611383 1305 ntBASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAM1L1Q8N609 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 AL591424.1-201ENST00000442569 1213 ntBASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 HCG4B-203ENST00000450128 991 ntBASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 FAM197Y3-203ENST00000618346 717 ntBASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms