Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PROM2Q8N271 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
PROM2Q8N271 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.62■■□□□ 1.05
PROM2Q8N271 AL133338.1-201ENST00000565695 1517 ntBASIC21.62■■□□□ 1.05
PROM2Q8N271 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PROM2Q8N271 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.62■■□□□ 1.05
PROM2Q8N271 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PROM2Q8N271 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PROM2Q8N271 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PROM2Q8N271 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC21.62■■□□□ 1.05
PROM2Q8N271 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PROM2Q8N271 SNX29P1-201ENST00000548357 1007 ntBASIC21.62■■□□□ 1.05
PROM2Q8N271 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PROM2Q8N271 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC21.62■■□□□ 1.05
PROM2Q8N271 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
PROM2Q8N271 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.62■■□□□ 1.05
PROM2Q8N271 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.62■■□□□ 1.05
PROM2Q8N271 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PROM2Q8N271 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PROM2Q8N271 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.62■■□□□ 1.05
PROM2Q8N271 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PROM2Q8N271 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.61■■□□□ 1.05
PROM2Q8N271 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PROM2Q8N271 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC21.61■■□□□ 1.05
PROM2Q8N271 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.61■■□□□ 1.05
PROM2Q8N271 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PROM2Q8N271 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.61■■□□□ 1.05
PROM2Q8N271 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
PROM2Q8N271 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PROM2Q8N271 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC21.61■■□□□ 1.05
PROM2Q8N271 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PROM2Q8N271 AC087499.6-201ENST00000411576 835 ntBASIC21.61■■□□□ 1.05
PROM2Q8N271 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PROM2Q8N271 HCG4-201ENST00000418983 998 ntBASIC21.61■■□□□ 1.05
PROM2Q8N271 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PROM2Q8N271 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC21.61■■□□□ 1.05
PROM2Q8N271 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
PROM2Q8N271 AC105233.2-201ENST00000523697 349 ntBASIC21.61■■□□□ 1.05
PROM2Q8N271 FAM8A2P-201ENST00000528813 1142 ntBASIC21.61■■□□□ 1.05
PROM2Q8N271 AF228730.5-201ENST00000530288 346 ntBASIC21.61■■□□□ 1.05
PROM2Q8N271 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC21.61■■□□□ 1.05
PROM2Q8N271 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC21.61■■□□□ 1.05
PROM2Q8N271 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC21.61■■□□□ 1.05
PROM2Q8N271 MIR3908-201ENST00000579798 126 ntBASIC21.61■■□□□ 1.05
PROM2Q8N271 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC21.61■■□□□ 1.05
PROM2Q8N271 MIR6775-201ENST00000617557 69 ntBASIC21.61■■□□□ 1.05
PROM2Q8N271 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PROM2Q8N271 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PROM2Q8N271 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PROM2Q8N271 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PROM2Q8N271 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PROM2Q8N271 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PROM2Q8N271 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PROM2Q8N271 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
PROM2Q8N271 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PROM2Q8N271 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.6■■□□□ 1.05
PROM2Q8N271 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PROM2Q8N271 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PROM2Q8N271 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PROM2Q8N271 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PROM2Q8N271 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PROM2Q8N271 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.6■■□□□ 1.05
PROM2Q8N271 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC21.6■■□□□ 1.05
PROM2Q8N271 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PROM2Q8N271 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PROM2Q8N271 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC21.6■■□□□ 1.05
PROM2Q8N271 AC004945.1-201ENST00000416738 983 ntBASIC21.6■■□□□ 1.05
PROM2Q8N271 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.6■■□□□ 1.05
PROM2Q8N271 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC21.6■■□□□ 1.05
PROM2Q8N271 BANF1P1-201ENST00000553684 263 ntBASIC21.6■■□□□ 1.05
PROM2Q8N271 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC21.6■■□□□ 1.05
PROM2Q8N271 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC21.6■■□□□ 1.05
PROM2Q8N271 COX11-210ENST00000639671 696 ntBASIC21.6■■□□□ 1.05
PROM2Q8N271 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PROM2Q8N271 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PROM2Q8N271 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PROM2Q8N271 AL035456.1-201ENST00000456064 1369 ntBASIC21.6■■□□□ 1.05
PROM2Q8N271 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.6■■□□□ 1.05
PROM2Q8N271 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PROM2Q8N271 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.6■■□□□ 1.05
PROM2Q8N271 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC21.59■■□□□ 1.05
PROM2Q8N271 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PROM2Q8N271 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.59■■□□□ 1.05
PROM2Q8N271 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.59■■□□□ 1.05
PROM2Q8N271 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.59■■□□□ 1.05
PROM2Q8N271 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PROM2Q8N271 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
PROM2Q8N271 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PROM2Q8N271 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PROM2Q8N271 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PROM2Q8N271 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC21.59■■□□□ 1.05
PROM2Q8N271 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PROM2Q8N271 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC21.59■■□□□ 1.05
PROM2Q8N271 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
PROM2Q8N271 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC21.59■■□□□ 1.05
PROM2Q8N271 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.59■■□□□ 1.05
PROM2Q8N271 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC21.59■■□□□ 1.05
PROM2Q8N271 RN7SL828P-201ENST00000607615 303 ntBASIC21.59■■□□□ 1.05
PROM2Q8N271 AC099568.2-201ENST00000609194 695 ntBASIC21.59■■□□□ 1.05
PROM2Q8N271 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms