Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLF2Q8IX21 TOP3BP1-201ENST00000420768 1380 ntBASIC20.38■□□□□ 0.85
SLF2Q8IX21 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLF2Q8IX21 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLF2Q8IX21 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLF2Q8IX21 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.38■□□□□ 0.85
SLF2Q8IX21 HMGA1P7-201ENST00000406908 502 ntBASIC20.38■□□□□ 0.85
SLF2Q8IX21 TSEN15P1-201ENST00000423257 515 ntBASIC20.38■□□□□ 0.85
SLF2Q8IX21 ADH5P3-201ENST00000433842 1137 ntBASIC20.38■□□□□ 0.85
SLF2Q8IX21 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.38■□□□□ 0.85
SLF2Q8IX21 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLF2Q8IX21 AC091167.2-201ENST00000579581 588 ntBASIC20.38■□□□□ 0.85
SLF2Q8IX21 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLF2Q8IX21 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLF2Q8IX21 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.38■□□□□ 0.85
SLF2Q8IX21 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLF2Q8IX21 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.38■□□□□ 0.85
SLF2Q8IX21 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLF2Q8IX21 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLF2Q8IX21 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLF2Q8IX21 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLF2Q8IX21 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.37■□□□□ 0.85
SLF2Q8IX21 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLF2Q8IX21 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLF2Q8IX21 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.37■□□□□ 0.85
SLF2Q8IX21 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLF2Q8IX21 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLF2Q8IX21 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLF2Q8IX21 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.37■□□□□ 0.85
SLF2Q8IX21 SPDYE11-202ENST00000450699 704 ntBASIC20.37■□□□□ 0.85
SLF2Q8IX21 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SLF2Q8IX21 RN7SL589P-201ENST00000481268 310 ntBASIC20.37■□□□□ 0.85
SLF2Q8IX21 RFPL4AP1-201ENST00000530883 850 ntBASIC20.37■□□□□ 0.85
SLF2Q8IX21 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
SLF2Q8IX21 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.37■□□□□ 0.85
SLF2Q8IX21 SPDYE9P-201ENST00000570642 692 ntBASIC20.37■□□□□ 0.85
SLF2Q8IX21 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLF2Q8IX21 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.37■□□□□ 0.85
SLF2Q8IX21 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.37■□□□□ 0.85
SLF2Q8IX21 AC099522.2-201ENST00000607001 744 ntBASIC20.37■□□□□ 0.85
SLF2Q8IX21 SPDYE10P-202ENST00000612005 668 ntBASIC20.37■□□□□ 0.85
SLF2Q8IX21 SPDYE8P-202ENST00000612377 668 ntBASIC20.37■□□□□ 0.85
SLF2Q8IX21 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
SLF2Q8IX21 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.37■□□□□ 0.85
SLF2Q8IX21 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLF2Q8IX21 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.37■□□□□ 0.85
SLF2Q8IX21 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.37■□□□□ 0.85
SLF2Q8IX21 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLF2Q8IX21 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLF2Q8IX21 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
SLF2Q8IX21 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLF2Q8IX21 AC134043.2-201ENST00000624206 2238 ntBASIC20.37■□□□□ 0.85
SLF2Q8IX21 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.36■□□□□ 0.85
SLF2Q8IX21 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SLF2Q8IX21 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SLF2Q8IX21 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.36■□□□□ 0.85
SLF2Q8IX21 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.36■□□□□ 0.85
SLF2Q8IX21 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.36■□□□□ 0.85
SLF2Q8IX21 TIMM8BP1-201ENST00000452384 211 ntBASIC20.36■□□□□ 0.85
SLF2Q8IX21 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SLF2Q8IX21 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.36■□□□□ 0.85
SLF2Q8IX21 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.36■□□□□ 0.85
SLF2Q8IX21 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SLF2Q8IX21 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.36■□□□□ 0.85
SLF2Q8IX21 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.36■□□□□ 0.85
SLF2Q8IX21 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.36■□□□□ 0.85
SLF2Q8IX21 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLF2Q8IX21 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.36■□□□□ 0.85
SLF2Q8IX21 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLF2Q8IX21 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLF2Q8IX21 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLF2Q8IX21 AC116353.5-201ENST00000638148 1699 ntBASIC20.35■□□□□ 0.85
SLF2Q8IX21 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLF2Q8IX21 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
SLF2Q8IX21 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.35■□□□□ 0.85
SLF2Q8IX21 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLF2Q8IX21 AKAP8P1-201ENST00000434743 1349 ntBASIC20.35■□□□□ 0.85
SLF2Q8IX21 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLF2Q8IX21 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLF2Q8IX21 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.35■□□□□ 0.85
SLF2Q8IX21 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.35■□□□□ 0.85
SLF2Q8IX21 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
SLF2Q8IX21 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms