Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 NUS1P1-201ENST00000446295 882 ntBASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 AC099336.1-202ENST00000602961 463 ntBASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 AC069148.1-201ENST00000608741 768 ntBASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC83Q8IWF9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 OR6D1P-203ENST00000641209 4860 ntBASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CCDC83Q8IWF9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 PCDHB17P-201ENST00000539533 2393 ntBASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 NUS1P2-201ENST00000417358 873 ntBASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 AC092329.2-201ENST00000598402 547 ntBASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC83Q8IWF9 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CCDC83Q8IWF9 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms