Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 AL671277.1-201ENST00000429656 993 ntBASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 AC005237.2-201ENST00000434368 219 ntBASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 CNN2P2-201ENST00000443536 909 ntBASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 CNN2P3-201ENST00000450201 906 ntBASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 AC093520.2-201ENST00000561830 333 ntBASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 MIR4515-201ENST00000584082 81 ntBASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 AL136317.3-201ENST00000618497 906 ntBASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC149Q6ZUS6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
CCDC149Q6ZUS6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC149Q6ZUS6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 SPDYE11-202ENST00000450699 704 ntBASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 SPDYE9P-201ENST00000570642 692 ntBASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 AC005412.3-201ENST00000580309 715 ntBASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 SPDYE10P-202ENST00000612005 668 ntBASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 SPDYE8P-202ENST00000612377 668 ntBASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC149Q6ZUS6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC149Q6ZUS6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms