Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 TSSK5P-201ENST00000423978 907 ntBASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 AL138918.1-201ENST00000568306 659 ntBASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CNKSR3Q6P9H4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 AC142381.1-201ENST00000426099 345 ntBASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 AC105233.2-201ENST00000523697 349 ntBASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 AF228730.5-201ENST00000530288 346 ntBASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 RARRES2P9-201ENST00000565168 469 ntBASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.27■□□□□ 0.52
CNKSR3Q6P9H4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CNKSR3Q6P9H4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.27■□□□□ 0.51
CNKSR3Q6P9H4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CNKSR3Q6P9H4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNKSR3Q6P9H4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNKSR3Q6P9H4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 EGFEM1P-202ENST00000431685 1563 ntBASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 AC022144.1-201ENST00000602255 1580 ntBASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 OR8S1-201ENST00000310194 1080 ntBASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 NME2P1-201ENST00000426182 414 ntBASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 AL596325.1-201ENST00000563991 1082 ntBASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 SPDYE12P-201ENST00000618416 771 ntBASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 AC131009.4-201ENST00000624048 1740 ntBASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 AC098818.2-201ENST00000564925 2320 ntBASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNKSR3Q6P9H4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 ABALON-201ENST00000629058 1903 ntBASIC18.25■□□□□ 0.51
CNKSR3Q6P9H4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms