Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF220Q5VTB9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF220Q5VTB9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF220Q5VTB9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF220Q5VTB9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF220Q5VTB9 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF220Q5VTB9 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF220Q5VTB9 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 AC140113.3-201ENST00000605663 199 ntBASIC16.59■□□□□ 0.25
RNF220Q5VTB9 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 AC126177.1-201ENST00000547829 2218 ntBASIC16.59■□□□□ 0.25
RNF220Q5VTB9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF220Q5VTB9 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF220Q5VTB9 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF220Q5VTB9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF220Q5VTB9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF220Q5VTB9 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
RNF220Q5VTB9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
RNF220Q5VTB9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF220Q5VTB9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF220Q5VTB9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.58■□□□□ 0.25
RNF220Q5VTB9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
RNF220Q5VTB9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.58■□□□□ 0.25
RNF220Q5VTB9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 AC024563.2-201ENST00000603282 481 ntBASIC16.58■□□□□ 0.24
RNF220Q5VTB9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 AC133561.5-201ENST00000635547 218 ntBASIC16.58■□□□□ 0.24
RNF220Q5VTB9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
RNF220Q5VTB9 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
RNF220Q5VTB9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms