Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC21.36■■□□□ 1.01
RC3H1Q5TC82 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 ABALON-201ENST00000629058 1903 ntBASIC21.35■■□□□ 1.01
RC3H1Q5TC82 FOXO1B-201ENST00000504678 1527 ntBASIC21.35■■□□□ 1.01
RC3H1Q5TC82 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 SLC25A6P5-201ENST00000435663 894 ntBASIC21.35■■□□□ 1.01
RC3H1Q5TC82 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 AC009407.1-201ENST00000568958 598 ntBASIC21.35■■□□□ 1.01
RC3H1Q5TC82 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 CYP2A7P1-201ENST00000595391 815 ntBASIC21.35■■□□□ 1.01
RC3H1Q5TC82 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 AL035456.1-201ENST00000456064 1369 ntBASIC21.35■■□□□ 1.01
RC3H1Q5TC82 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RC3H1Q5TC82 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.34■■□□□ 1.01
RC3H1Q5TC82 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 AC087499.5-201ENST00000452760 1342 ntBASIC21.34■■□□□ 1.01
RC3H1Q5TC82 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 HLA-V-201ENST00000429037 534 ntBASIC21.34■■□□□ 1.01
RC3H1Q5TC82 KRT18P34-201ENST00000488218 1270 ntBASIC21.34■■□□□ 1.01
RC3H1Q5TC82 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RC3H1Q5TC82 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 AC098818.2-201ENST00000564925 2320 ntBASIC21.33■■□□□ 1.01
RC3H1Q5TC82 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 SLC25A1P3-201ENST00000395415 828 ntBASIC21.33■■□□□ 1.01
RC3H1Q5TC82 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
RC3H1Q5TC82 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RC3H1Q5TC82 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.33■■□□□ 1
RC3H1Q5TC82 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.32■■□□□ 1
RC3H1Q5TC82 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
RC3H1Q5TC82 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
RC3H1Q5TC82 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC21.32■■□□□ 1
RC3H1Q5TC82 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.32■■□□□ 1
RC3H1Q5TC82 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RC3H1Q5TC82 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms